Populus trichocarpa (black cottonwood): 18109451
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Entry
18109451 CDS
T01077
Name
(RefSeq) glutamate receptor 2.8
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18109451
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
18109451
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_5
Motif
Other DBs
NCBI-GeneID:
18109451
NCBI-ProteinID:
XP_024460464
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Position
6:17803732..17809317
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AA seq
961 aa
AA seq
DB search
MGKVIIRVGVVLDMNSVVGKTAENCISAAANDFYARNADYRTRISLVTRDSKGDVVTAAS
AALDLMKNEEVEAIIGPQRSSEAKFVIELGNKTQVPILSFSATSPALTPVQSNYFIRTAQ
SDSSQVKAIASIVETYGWREIVLIYEGTEYGIALVPYLLHAFHEIGTRVPYESCIPSSFD
DTEIMSELQKIKKMQESVFLVHMTASMGSRLFLLAESAGMMSEGYAWLVTTGLSTLLDPV
DAKVMDSMQGVLGVKPYVPKSIELEGFKSRWKKNFNSENLFGLWAYDTVWAIAMAVERAG
IVHSSFLKQNASNRSVDLAALGISEMGPRLLKSILNTTFDGLSGKFQLVKGEMAPFAFEI
FNVVGRSERVIGYWTEKGGLSQSLDSSSKISHSNSKTKLKQPIWPGGTIQQPKKLRIGVP
VRSDFSEFIKVEWDQQSNEPIVSGFSAEVFLAVHDILPFPLPYEFIPFMNESSRKSAGTY
DDLLRQIEHQKFDAVVGDTTIVAYRSSYVDFTLPYSESGITMVVLMKRDERDNMWIFLKP
LSPKLWLVTGVAFFVTGLVVWVLEHRTNTEFRGTPEQQLGTVIWFSFSTLVFAHRERPEN
NLTKFVLIIWMFVVLIISQSYTASLASMLTVQRMHPAFVDVTEIQRNNYFVGHHKDSFVK
DFLKKELHFNDTMLREYSTPEEFHDALSRGSHNGGVAAIFEEIPYVRRFLNDKYRCSKFQ
MVGPTYQTDGFGFAFPLNSPLVSHISRAILNVTEDHDKMEAITSKSFGREITCEDRGAET
SSGGLRLSSFAGLFLISGVASISSLLIYIIRFLFSNYPASNTMHEEQSMWLRILEVAKRF
DQKDPSVHHLRRAESRVHPVTGPESIGASPETGNVHEMTSNEGAEDVGENQNHDNLTSGN
SGTNFIASNADTVAPNTPEKNRASPDTAYVHEMTSDEGAEVVVGDQNRGNPTSVNSGKIL
T
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggtgattatacgagtaggagtggttcttgatatgaactcagtagtcggaaaa
acggcagagaactgcatatctgctgcagcaaacgatttttatgctaggaatgctgattat
cggactagaatctctcttgtcaccagggattccaaaggggacgtcgtaacagcagcatct
gcagcactggatttaatgaaaaatgaagaagttgaagcaatcatagggcctcaaagatca
tcagaagccaagtttgtgatagagcttggaaacaagacacaagtgccaattctctctttt
tcagctactagtcctgctctcactccagttcaaagcaattactttatccggacagctcag
agtgattcctctcaagtgaaagccattgccagcattgtcgaaacttatggttggagggaa
attgttctaatctatgaaggcacagaatatggcattgctttggttccatatttgctacat
gccttccacgagattggtactcgagttccctatgaaagttgcattccatcgtctttcgat
gacactgaaatcatgagcgagctccagaaaataaagaaaatgcaggaaagcgtgtttctg
gtgcacatgacagcctccatgggatccaggctattcttactcgccgaaagcgcaggaatg
atgagtgaagggtatgcatggctcgtgacaacaggattgtccaccttattagatcctgtg
gacgcaaaagtaatggattctatgcaaggtgtattaggtgtaaagccatatgtaccaaaa
tcaatagaacttgaaggtttcaaatcaagatggaaaaagaatttcaactctgaaaacctc
tttggtttatgggcatatgatacagtttgggcgatagcaatggcagtggagagggctggc
attgtgcattctagtttcttaaaacaaaacgcaagcaacaggtcagttgatcttgcggct
ttgggaatctcagaaatggggccaagactcctgaagtccatattaaacactacctttgat
ggcttgagcggaaagttccagttggttaagggtgagatggcacctttcgcctttgaaata
ttcaatgtggtggggagatcagagagggttattggatattggacagaaaaaggaggactt
tctcagagcttggatagcagtagtaaaatatcacactcaaattccaaaaccaaactgaag
caaccaatttggccaggaggcacaatacaacagccgaagaaattgaggattggggttcca
gtgagaagcgattttagcgaatttataaaagtcgaatgggatcagcagagcaatgagcct
attgtttcaggcttctctgcagaggttttccttgcagtgcatgatatattaccatttccc
cttccgtatgaattcataccctttatgaacgaaagtagtaggaagagtgccgggacttac
gatgatcttcttcggcaaatcgaacatcagaaatttgatgcagtggttggagatacaacg
atagtggcttatcgctcatcatatgtagatttcaccttgccttactcggaatcaggcata
acaatggtggttttgatgaaacgcgatgagagggataacatgtggattttcttgaagcca
ctaagcccgaaactttggttagtaactggagtagccttctttgtcacaggtttagtggta
tgggtgctcgaacaccgtacaaacacagagtttaggggaacaccagagcaacaactgggc
acagttatttggttctccttctcaacactggtctttgcacatagggagaggccagagaac
aacctaacaaaatttgtcttgatcatatggatgtttgtggtacttattatatctcagagt
tacactgctagcttagcctcaatgctaacagtacagcggatgcatcccgcatttgttgat
gtcacagagatccagaggaataattactttgttggacaccataaagattcttttgtgaaa
gatttccttaaaaaagaattacatttcaatgacacgatgttgagggaatatagcactcca
gaggagtttcacgatgcgttgtctagagggtctcataatggtggtgtggctgctatcttc
gaagaaattccctacgttagacgcttccttaacgacaagtaccgctgctctaaatttcaa
atggtaggaccaacctatcaaaccgatggatttggctttgccttcccacttaactcccca
ctagtctctcatatctcaagagcaatcttgaatgtcactgaagatcatgataaaatggaa
gcaattacgagtaaaagctttggtagggaaatcacctgtgaagatcgaggagctgaaacc
tcttcaggtggtctaaggttgtctagcttcgcgggcctcttccttatctctggagttgct
tccatatcttcgctcctgatatatatcattaggttccttttctcaaattatcctgcttcg
aacacaatgcatgaagaacaatccatgtggctgagaattcttgaggtagcaaagcgtttt
gaccagaaagatccctccgtccatcatcttaggcgagctgaatctagagttcaccctgtc
acaggtcctgaaagtattggagcctcacctgagactggcaacgtgcatgaaatgacttcc
aatgaaggagccgaagatgttggagaaaatcaaaaccatgacaatcttacctcggggaat
agtggtacaaattttattgcctccaatgcagatactgttgcccctaacactccggaaaaa
aaccgagcttcacctgatactgcctatgtgcatgaaatgacttccgatgaaggagccgaa
gttgttgttggggatcaaaaccgcgggaatcctacctcagtgaacagtggtaaaatacta
acataa
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