KEGG   Populus trichocarpa (black cottonwood): 18109451
Entry
18109451          CDS       T01077                                 
Name
(RefSeq) glutamate receptor 2.8
  KO
K05387  glutamate receptor, ionotropic, plant
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pop04040]
    18109451
Ion channels [BR:pop04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   18109451
SSDB
Motif
Pfam: ANF_receptor Lig_chan Peripla_BP_6 Lig_chan-Glu_bd SBP_bac_3 Peripla_BP_5
Other DBs
NCBI-GeneID: 18109451
NCBI-ProteinID: XP_024460464
LinkDB
Position
6:17803732..17809317
AA seq 961 aa
MGKVIIRVGVVLDMNSVVGKTAENCISAAANDFYARNADYRTRISLVTRDSKGDVVTAAS
AALDLMKNEEVEAIIGPQRSSEAKFVIELGNKTQVPILSFSATSPALTPVQSNYFIRTAQ
SDSSQVKAIASIVETYGWREIVLIYEGTEYGIALVPYLLHAFHEIGTRVPYESCIPSSFD
DTEIMSELQKIKKMQESVFLVHMTASMGSRLFLLAESAGMMSEGYAWLVTTGLSTLLDPV
DAKVMDSMQGVLGVKPYVPKSIELEGFKSRWKKNFNSENLFGLWAYDTVWAIAMAVERAG
IVHSSFLKQNASNRSVDLAALGISEMGPRLLKSILNTTFDGLSGKFQLVKGEMAPFAFEI
FNVVGRSERVIGYWTEKGGLSQSLDSSSKISHSNSKTKLKQPIWPGGTIQQPKKLRIGVP
VRSDFSEFIKVEWDQQSNEPIVSGFSAEVFLAVHDILPFPLPYEFIPFMNESSRKSAGTY
DDLLRQIEHQKFDAVVGDTTIVAYRSSYVDFTLPYSESGITMVVLMKRDERDNMWIFLKP
LSPKLWLVTGVAFFVTGLVVWVLEHRTNTEFRGTPEQQLGTVIWFSFSTLVFAHRERPEN
NLTKFVLIIWMFVVLIISQSYTASLASMLTVQRMHPAFVDVTEIQRNNYFVGHHKDSFVK
DFLKKELHFNDTMLREYSTPEEFHDALSRGSHNGGVAAIFEEIPYVRRFLNDKYRCSKFQ
MVGPTYQTDGFGFAFPLNSPLVSHISRAILNVTEDHDKMEAITSKSFGREITCEDRGAET
SSGGLRLSSFAGLFLISGVASISSLLIYIIRFLFSNYPASNTMHEEQSMWLRILEVAKRF
DQKDPSVHHLRRAESRVHPVTGPESIGASPETGNVHEMTSNEGAEDVGENQNHDNLTSGN
SGTNFIASNADTVAPNTPEKNRASPDTAYVHEMTSDEGAEVVVGDQNRGNPTSVNSGKIL
T
NT seq 2886 nt   +upstreamnt  +downstreamnt
atggggaaggtgattatacgagtaggagtggttcttgatatgaactcagtagtcggaaaa
acggcagagaactgcatatctgctgcagcaaacgatttttatgctaggaatgctgattat
cggactagaatctctcttgtcaccagggattccaaaggggacgtcgtaacagcagcatct
gcagcactggatttaatgaaaaatgaagaagttgaagcaatcatagggcctcaaagatca
tcagaagccaagtttgtgatagagcttggaaacaagacacaagtgccaattctctctttt
tcagctactagtcctgctctcactccagttcaaagcaattactttatccggacagctcag
agtgattcctctcaagtgaaagccattgccagcattgtcgaaacttatggttggagggaa
attgttctaatctatgaaggcacagaatatggcattgctttggttccatatttgctacat
gccttccacgagattggtactcgagttccctatgaaagttgcattccatcgtctttcgat
gacactgaaatcatgagcgagctccagaaaataaagaaaatgcaggaaagcgtgtttctg
gtgcacatgacagcctccatgggatccaggctattcttactcgccgaaagcgcaggaatg
atgagtgaagggtatgcatggctcgtgacaacaggattgtccaccttattagatcctgtg
gacgcaaaagtaatggattctatgcaaggtgtattaggtgtaaagccatatgtaccaaaa
tcaatagaacttgaaggtttcaaatcaagatggaaaaagaatttcaactctgaaaacctc
tttggtttatgggcatatgatacagtttgggcgatagcaatggcagtggagagggctggc
attgtgcattctagtttcttaaaacaaaacgcaagcaacaggtcagttgatcttgcggct
ttgggaatctcagaaatggggccaagactcctgaagtccatattaaacactacctttgat
ggcttgagcggaaagttccagttggttaagggtgagatggcacctttcgcctttgaaata
ttcaatgtggtggggagatcagagagggttattggatattggacagaaaaaggaggactt
tctcagagcttggatagcagtagtaaaatatcacactcaaattccaaaaccaaactgaag
caaccaatttggccaggaggcacaatacaacagccgaagaaattgaggattggggttcca
gtgagaagcgattttagcgaatttataaaagtcgaatgggatcagcagagcaatgagcct
attgtttcaggcttctctgcagaggttttccttgcagtgcatgatatattaccatttccc
cttccgtatgaattcataccctttatgaacgaaagtagtaggaagagtgccgggacttac
gatgatcttcttcggcaaatcgaacatcagaaatttgatgcagtggttggagatacaacg
atagtggcttatcgctcatcatatgtagatttcaccttgccttactcggaatcaggcata
acaatggtggttttgatgaaacgcgatgagagggataacatgtggattttcttgaagcca
ctaagcccgaaactttggttagtaactggagtagccttctttgtcacaggtttagtggta
tgggtgctcgaacaccgtacaaacacagagtttaggggaacaccagagcaacaactgggc
acagttatttggttctccttctcaacactggtctttgcacatagggagaggccagagaac
aacctaacaaaatttgtcttgatcatatggatgtttgtggtacttattatatctcagagt
tacactgctagcttagcctcaatgctaacagtacagcggatgcatcccgcatttgttgat
gtcacagagatccagaggaataattactttgttggacaccataaagattcttttgtgaaa
gatttccttaaaaaagaattacatttcaatgacacgatgttgagggaatatagcactcca
gaggagtttcacgatgcgttgtctagagggtctcataatggtggtgtggctgctatcttc
gaagaaattccctacgttagacgcttccttaacgacaagtaccgctgctctaaatttcaa
atggtaggaccaacctatcaaaccgatggatttggctttgccttcccacttaactcccca
ctagtctctcatatctcaagagcaatcttgaatgtcactgaagatcatgataaaatggaa
gcaattacgagtaaaagctttggtagggaaatcacctgtgaagatcgaggagctgaaacc
tcttcaggtggtctaaggttgtctagcttcgcgggcctcttccttatctctggagttgct
tccatatcttcgctcctgatatatatcattaggttccttttctcaaattatcctgcttcg
aacacaatgcatgaagaacaatccatgtggctgagaattcttgaggtagcaaagcgtttt
gaccagaaagatccctccgtccatcatcttaggcgagctgaatctagagttcaccctgtc
acaggtcctgaaagtattggagcctcacctgagactggcaacgtgcatgaaatgacttcc
aatgaaggagccgaagatgttggagaaaatcaaaaccatgacaatcttacctcggggaat
agtggtacaaattttattgcctccaatgcagatactgttgcccctaacactccggaaaaa
aaccgagcttcacctgatactgcctatgtgcatgaaatgacttccgatgaaggagccgaa
gttgttgttggggatcaaaaccgcgggaatcctacctcagtgaacagtggtaaaatacta
acataa

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