Populus trichocarpa (black cottonwood): 18109485
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Entry
18109485 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase BOI
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18109485
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18109485
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18109485
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
HrpB2
FliD_C
PolyA_pol
Motif
Other DBs
NCBI-GeneID:
18109485
NCBI-ProteinID:
XP_024449204
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All DBs
Position
1:12337952..12340447
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AA seq
348 aa
AA seq
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MAVQAQYPSNALLLNRNGQDGHDYSLQPQPGGYLDQSHMLLNNGGGNNPRKRGRTAPTAT
TTTTTINKLCMQPQTQPQPLSTTQLIDLSQLHNHRSYHPQPNPNVVSTGLRLSFGDQHHQ
QQQNHHYQQQNFGTSTCQSSALLSISEDFSTQIKRQRDEIDQFLQAQGEQLRRALAEKRQ
QHYRALLGAAEESIARRLRESEAEVQRATRKNAELEARASQLSIEAQVWQAKARTQEVTA
TSLQAQLQQAIMNGGVVQDSRRGDGGTGCSGGVEGQGQAEDAESAYVDPDRVTVVPGRPS
CKSCRKRMASVVLLPCRHLCVCTECDQMVQACPLCLHVRNSSVEVFLC
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccaagctcaatatccttctaatgccctccttctaaacagaaacggtcaagac
ggtcacgattattcattgcaaccacagcctggaggatatcttgatcaatcccatatgtta
ctcaacaatggaggtggcaataatccgcgcaagagaggaagaacagcgccaacagctact
actacaacgacaacaatcaataaattatgtatgcaacctcaaactcagcctcagcctctg
tcaacaactcagttaatagacctatctcaactccacaaccatcgaagttatcatcctcaa
ccaaatccaaatgtcgtgtctactggccttcgtttatcttttggtgaccaacaccaccaa
caacaacagaatcatcattaccaacagcagaattttggcactagtacatgtcaatcctct
gctttgttatcaatatcagaagatttctccacccaaattaaacggcaacgagatgagatt
gatcaattccttcaagcccagggggagcagctgaggcgcgcattagcagagaaaagacag
cagcactaccgtgcgctattaggcgcagcggaggaatcaatagccagacgattaagggaa
agtgaagcggaagtccagagggccacgcgcaaaaacgccgagttagaagcacgtgcgtcg
caactcagcattgaggcacaagtttggcaggcaaaggcaaggacccaggaggtaacagca
acttccctgcaggcccaactgcagcaggctataatgaacgggggagtggtgcaggatagc
aggagaggggatggtggaacaggatgttcggggggagttgaaggccagggccaggctgag
gatgctgagtcggcttatgttgatcctgaccgggtcaccgtcgttccaggccgaccaagc
tgcaaatcgtgtcggaaacggatggcttcggttgtgcttctgccgtgtcggcatctttgt
gtctgtacagaatgtgaccaaatggtccaagcctgcccactttgcctccatgttagaaat
tccagtgttgaggtatttctgtgttaa
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