Populus trichocarpa (black cottonwood): 18109759
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Entry
18109759 CDS
T01077
Name
(RefSeq) hsp70 nucleotide exchange factor FES1-like
KO
K03265
peptide chain release factor subunit 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18109759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18109759
03012 Translation factors [BR:
pop03012
]
18109759
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
18109759
Translation factors [BR:
pop03012
]
Eukaryotic type
Release factors
18109759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_3
Fes1
Arm
HEAT_2
HEAT_EZ
HEAT
Motif
Other DBs
NCBI-GeneID:
18109759
NCBI-ProteinID:
XP_024453903
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Position
3:complement(16932103..16934672)
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AA seq
408 aa
AA seq
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MERVVLRFLLASAVILTAATVISGERVNETSATAELVWSKGKLESDLLSKPQPGNSDYLS
AGADVDDHDGGFSSLDGVLRWTIGHSDPAKLKESAEDVQRLSASELQKRQLEIKLIEKMN
MPSDAQLMQIAIDDLNNSSSSLEDRQRALQELLILVEPLDNANDLNKLGGLAIVIQELNH
PDPDIRRLSAWVLGKAYQNNPVVQKQILELGALTKLIKMVKSNSIEEAIKALYAVSALIR
NNLSGQELFYAEAGDTMLQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVW
ESLDINRYQLKNSATGEIVIKHLNKEQETNQDNFRDAETKAELEVQDKMPLLEWFANEYK
RFGCTLEFVTNKSQEGSQFCRGIGGILRYQLDMRSFDLSDGDVYDDSE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgtcgttttaaggtttctgttggcctcggcagtgattttaaccgctgcaacg
gtgattagtggcgagcgagtcaatgaaacttctgctacagcggagttagtgtggtcaaaa
ggaaaactggagtctgatctcttgagcaagcctcagccgggaaacagcgactatttatcc
gcgggtgcggatgttgacgaccatgacggcgggttttcttctcttgatggagtgttacga
tggaccattgggcattctgatccagcgaaattaaaagaaagtgcagaagatgttcagagg
ttgtctgctagtgagttacagaagcgtcaattagaaattaagttgatagagaagatgaac
atgccatccgatgcacagttgatgcagatagcgatagatgatttaaacaattcatcttca
tctttggaagatcgccaacgtgcgttgcaggaacttctcatacttgttgagccacttgat
aatgcaaatgatttgaacaaacttggtggtcttgccatagtaatccaagaacttaatcat
cctgacccagacataaggagactttctgcatgggttcttggaaaagcttatcaaaataat
ccagttgttcaaaaacagattttggaacttggggcactgactaagctaataaagatggta
aaatctaattccatagaagaagccattaaagcactatatgctgtttcggcattgatccga
aacaatttatctggtcaggagttgttttatgctgaagctggggatacaatgcttcaggag
aagcgcttgataggcaagtactttgaagagataagtcaggatacaggaaaatatgttttt
ggtgttgatgacactctgaaagctttggagatgggtgctgttgaaactctaattgtgtgg
gaaagtttggatattaataggtaccagttgaaaaactctgccactggtgagattgtcata
aaacatctgaataaggagcaggaaaccaaccaggacaactttagggatgcagaaaccaaa
gctgaactggaagttcaagataaaatgccactgctggagtggtttgcaaatgagtacaag
cgttttggttgcactctagagtttgttactaacaaatcacaagaaggatcccagttttgc
agagggattggtggtatcctccgttaccagcttgatatgagatcatttgatctttctgat
ggagatgtttatgatgattctgaataa
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