KEGG   Populus trichocarpa (black cottonwood): 18109775
Entry
18109775          CDS       T01077                                 
Name
(RefSeq) histone H2AX
  KO
K11251  histone H2A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    18109775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pop03036]
    18109775
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    18109775
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    18109775
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18109775
SSDB
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF Cdc6_lid
Other DBs
NCBI-GeneID: 18109775
NCBI-ProteinID: XP_006388063
UniProt: B9MZP0
LinkDB
Position
5:2656617..2657719
AA seq 142 aa
MSSKEGGASTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS
AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH
QTLLPKKVGKGKGDIGSASQEF
NT seq 429 nt   +upstreamnt  +downstreamnt
atgagttcaaaagaaggaggcgcttctaccaagggagggagagggaaaccaaaggcatcg
aagtcggtgtcaagatcgcataaagcagggttgcaattcccagtcgggagaattgcaagg
ttcctgaaggctggtaaatatgctgaacgtgtcggtgccggagctcccgtctacctttct
gctgtccttgagtatctcgctgccgaggtgcttgagctagcagggaacgcagcaagagat
aacaagaagaatcgtatagtgccaaggcacatccagcttgctgtgagaaacgatgaggag
ctaagcaagctactggggtcagttacaattgcaaatggaggtgtcttgcctaacattcac
cagactcttcttcctaagaaggttggcaaagggaaaggcgacattggatctgcttctcaa
gagttctag

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