Populus trichocarpa (black cottonwood): 18109775
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Entry
18109775 CDS
T01077
Name
(RefSeq) histone H2AX
KO
K11251
histone H2A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18109775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18109775
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18109775
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
18109775
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18109775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
18109775
NCBI-ProteinID:
XP_006388063
UniProt:
B9MZP0
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All DBs
Position
5:2656617..2657719
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AA seq
142 aa
AA seq
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MSSKEGGASTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS
AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH
QTLLPKKVGKGKGDIGSASQEF
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaagaaggaggcgcttctaccaagggagggagagggaaaccaaaggcatcg
aagtcggtgtcaagatcgcataaagcagggttgcaattcccagtcgggagaattgcaagg
ttcctgaaggctggtaaatatgctgaacgtgtcggtgccggagctcccgtctacctttct
gctgtccttgagtatctcgctgccgaggtgcttgagctagcagggaacgcagcaagagat
aacaagaagaatcgtatagtgccaaggcacatccagcttgctgtgagaaacgatgaggag
ctaagcaagctactggggtcagttacaattgcaaatggaggtgtcttgcctaacattcac
cagactcttcttcctaagaaggttggcaaagggaaaggcgacattggatctgcttctcaa
gagttctag
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