Populus trichocarpa (black cottonwood): 18109866
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Entry
18109866 CDS
T01077
Name
(RefSeq) zinc finger CCCH domain-containing protein 11 isoform X2
KO
K27706
zinc finger CCCH domain-containing protein 15
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
18109866
Translation factors [BR:
pop03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
18109866
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DFRP_C
Torus
zf-CCCH
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
18109866
NCBI-ProteinID:
XP_006388158
UniProt:
U7DY53
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All DBs
Position
6:10879453..10883072
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AA seq
359 aa
AA seq
DB search
MPPKQQSKVDLAKKQKIVEDKTFGLKNKNKSKNVQKYVQSLKQNVQPQPDPSKLAAKKKK
EEEKAKEKELNELFKVAVSQPKVPVGVDPKSILCEFFKVGQCAKGFKCKFSHDLNVQRKG
EKIDIYSDKRDQETMEDWDQETLEKVVESKGKEYQQNKPTDIVCKYFLEAVEKKQYGWFW
VCPNGGKDCHYRHALPPGYVLKSQMKALLDEEAEKISIEEEIENQRAKTTTSTSMTPELF
MQWKKKKMEERDFGLAAQRAERAKNDRMSGRELFLSDASVFVDDAEAYEKYQREEEPDGT
EQKVNDKSTADGPSTSAAAVGDAEDLTDDDDELDMDELNELEASLSKTSIQIPERSGSH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagcagcaatcaaaagtagatttagcaaagaagcagaagatcgtagaagac
aagaccttcgggctcaaaaacaaaaacaagagtaaaaatgttcaaaaatatgtacaatcc
ctcaagcaaaacgtgcaaccccaacctgacccctctaaactcgccgccaagaaaaagaaa
gaggaagagaaggcaaaagagaaggagctaaatgaattgtttaaagttgctgttagccag
cccaaagttcctgttggtgttgatccaaagtcgatattgtgcgagttcttcaaagtgggg
cagtgcgcgaaaggcttcaaatgcaagttctcgcacgatttgaatgttcagcgaaaagga
gaaaagattgatatttatagtgacaagcgcgaccaagaaacaatggaggattgggaccaa
gagacattggagaaggtcgtggagtcaaagggaaaagagtatcagcagaataaacctact
gatattgtttgcaaatattttcttgaagcagtggagaagaaacaatatggttggttctgg
gtctgcccaaatggtggtaaagattgccattatcgtcatgctcttcctccagggtatgtt
ttgaaatctcagatgaaggctctattagatgaagaggcagaaaagatctccatcgaagag
gagattgaaaatcagcgtgcaaaaacaacaacttcaacctctatgactcctgagctgttc
atgcaatggaagaagaaaaagatggaagaaagagattttggtttggctgctcagagggca
gagagggctaagaatgatcgtatgagtggtcgggagctatttctatcagatgccagtgtg
tttgtggatgatgctgaggcatatgagaaatatcaaagagaggaagaacctgatggtact
gaacagaaggtaaatgataaatccactgctgatggaccgagtacctcagcagcagctgtt
ggtgatgctgaagatcttactgatgacgacgatgaacttgacatggacgagttaaatgag
ttggaggcaagtctatcaaaaacttcaatccaaattccagagcgcagtggcagtcattag
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