Populus trichocarpa (black cottonwood): 18109867
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Entry
18109867 CDS
T01077
Name
(RefSeq) protein DETOXIFICATION 29 isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18109867
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
18109867
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
18109867
NCBI-ProteinID:
XP_006388162
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Position
8:13071500..13077837
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AA seq
503 aa
AA seq
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MEGGRQSLVSRQNDHQNRDQHLRSTNSSIASSFTPDPDDIPLINSVRDFSREFFRESKKL
WYLAGPAIFTTLCQYSLGAITQLLAGHVGTLDLAAVSVENSVIAGFSFGIMLGMGSALET
LCGQAYGAGQLDMLGLYMQRSWVILNATAVILTLLYIFAGPFLKLIGQTAEISQAAGMFS
VWMIPQLFAYAMNFPIAKFLQAQSKMMAMAAIAAVAIVFHAVFSWLLMLKLGWGLVGAAV
VLNASWWFIVIAQLLYIFSGTCGEAWTGLSWKAFQNLWGFVRLSLASAVMLCLEVWYFMA
LILFAGYLKNAELAVDALSISTNIVGWALMIAIGINAAISVRVSNELGAAHPRTAKFSLV
VATLASLMIGLVIALILVLARNLYPDLFTNDAGVKELVKELTPLLAVCIIINNVQPVLSG
VAIGAGWQAAVAYVNIGCYYIFGIPLGLILGFWLQMGVQGIWIGMLTGTAVQTAVLFWMI
GKTNWNTEASAAEERIRKWGWGR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggcaggcaatcacttgtctcccgacaaaacgatcaccagaatcgagaccag
cacttacgatcaacaaactcctccatcgcctcctccttcactcctgatcctgatgacatc
cctctaatcaacagtgtccgtgatttctccagagaattctttagagagtccaagaagcta
tggtatcttgccggccctgccatcttcaccaccttgtgccagtactcccttggtgctatc
actcagcttcttgctggacatgttggcacgctggatctagctgctgtctctgttgagaat
tctgtcattgctggattctcttttggtatcatgcttggcatggggagtgccttggaaacc
ctttgtggacaagcgtatggagcagggcagcttgatatgctaggactctatatgcaaaga
tcttgggtcattcttaatgccacagctgttatacttacccttttatatatctttgctgga
ccatttttgaagcttattggtcagacagcagagatatcacaggcggcagggatgttctcg
gtgtggatgataccacagctatttgcttatgcaatgaactttccaattgcaaagttctta
caagctcaaagcaagatgatggctatggctgctatagcggcagtggccatagttttccat
gccgttttcagttggctattgatgttgaaattaggctggggtctggtgggtgcagccgtg
gttctaaacgcgtcatggtggttcatagtgattgctcaactgttgtatatttttagtgga
acttgcggggaagcatggaccggactttcttggaaagcttttcaaaatctctggggattt
gttaggttatctctggcatcagctgtaatgctttgcctggaagtatggtatttcatggca
ttaatactgttcgccggatatctaaaaaatgctgaacttgcagtggatgccttgtctata
agcaccaacatagtgggttgggcgctcatgatagccattggaatcaacgcagccataagc
gtgagagtgtcaaatgaactaggagctgcccacccaagaactgccaaattctctttagta
gtggccacgctagcttcgcttatgataggcctcgtaatcgcactaattcttgtcctggca
cggaacctatacccagacttgtttacgaacgatgctggagtcaaggaactagtaaaggag
ctcacacctctcctcgctgtctgcatcatcatcaataatgttcaaccagttctctcaggg
gtggccattggagcaggatggcaagctgctgttgcttatgtaaacatagggtgttactac
atatttggaattcccttgggtctcattcttggtttttggcttcaaatgggtgtccaggga
atttggattggaatgctgacagggactgccgtgcaaactgccgttctcttctggatgatt
ggtaaaaccaattggaacacagaggcttctgctgccgaagagaggataaggaaatggggg
tggggaagatga
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