Populus trichocarpa (black cottonwood): 18109954
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Entry
18109954 CDS
T01077
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18109954
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18109954
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18109954
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18109954
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
18109954
Ion channels [BR:
pop04040
]
Chloride channels
Chloride channel (CLC)
18109954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
18109954
NCBI-ProteinID:
XP_024448079
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MRERKMDLDNRATHGLHTVKEEDVEGDVENDAKGILNSYNGAYSTEPLLVKRRNTTSQTA
IVGANISLIESLDYEIAENELFKQDWRSRKKVQIFQYILLKWAFALLIGLFTGLVGFFNN
IAIENISGFKLLLTNKLMRKQQYYKAFAAFAGCNMVLAAAAAALCAFIAPAAAGSGIPEV
KAYLNGIDAHSILAPGTLFVKILGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKY
HLTWTWLRYFKNDRQRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFF
TTAVVAIVLRAFMEFCATGKCGLFGKGGLIMYDVSSEKVQYSGPDVLAVILLGIVGGIFG
SLYNYLVDKVLRTYSIINEKGAAFKISLVIAIALLTSCCSYGLPWFGRCIPCPTHITVSC
PNTDESGNYKSFQCPPGYYNDIASLFLSTNDDAIRNLFSASTKIEFRISTLFLFFSAVYC
LGIVTYGIAIPSGLFIPVILAGACYGRLVGRLFRSISNLDTGLFALLGAASFLGGTMRMT
VSLCVILLELTNDLLLLPLVMLVLLISKTVADNFNKGVYDHIVKLKGLPYMEAHAEPYMR
HLVARDVVSSPLVTFLGIEKVGNILHALRTTGHNGFPVIDEPPFSDAPELCGLVLRSHLL
VLLKGKNFSRERIPAGQEILRRFAVFDFAKAGSGKGVKLEDLDIEEEEMEMYVDLHPISN
ASPHTVVETMSLAKAAILFRQIGLRHMCVVPISQGRPPIVGILTRHDFMPEHILGLYPHI
KPHK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaagaaaaatggacttggataacagggccactcatggactgcatactgttaaa
gaagaagatgtggagggagacgttgaaaatgatgccaaaggaatactaaattcgtacaac
ggtgcttacagtactgaacccctcttggtgaaaaggaggaatacaacatcccagactgcc
attgttggtgccaacatttctcttattgaaagccttgactacgagattgctgaaaatgaa
ttatttaaacaagattggagatcaagaaagaaagttcagatatttcagtatattttactg
aagtgggcatttgcacttcttattggccttttcacaggacttgttggcttttttaataat
atcgcaattgagaacatatctggtttcaagttgttgctgactaataagctcatgagaaag
caacaatattacaaggcttttgcagcatttgctggttgcaacatggtgttggcggctgct
gctgcagctctatgcgctttcattgctccagcagcagcaggttctggtattcctgaagtg
aaagcctatcttaatggcattgatgctcattctatactggctcctggtaccctatttgta
aagattcttggttctattctcggtgtttctgctggatttgttgtgggtaaagaagggcct
atggttcacactggtgcatgcatagcctctttattagggcaggggggttctcgcaaatac
catttgacatggacgtggctcagatatttcaaaaatgatcgtcagagacgagatttgatc
acttgcggagctgctgctggtgtggctgctgcttttcgtgctccagttggaggcgttctt
ttcgctcttgaagaagcagcttcatggtggcggagtgctcttctttggagaactttcttc
actactgcagtggttgctatagttttgagagcttttatggaattttgcgctactggaaag
tgtgggctttttgggaaaggaggtctaataatgtatgatgtgagttcagaaaaggtacaa
tatagcggtccggatgttttagctgtgatactcttaggcatcgtcggggggatttttgga
agcttgtataactatcttgtggataaggttctccgtacttacagcatcatcaacgaaaaa
ggtgctgcttttaaaatctcacttgttattgccatcgccctgttgacatcttgttgttct
tacggcctgccttggttcgggaggtgcatcccctgccctactcatataacagtgagttgt
cctaacactgatgaatctggaaattacaaaagtttccagtgcccacctggttactacaat
gacattgcctccctttttcttagcactaatgatgatgctattcgcaacctctttagcgcc
agcactaaaatagaatttcgtatatccactctcttcctctttttctctgctgtttattgc
cttggcattgttacatatggaattgctatcccatctggacttttcatccccgttatttta
gctggagcttgctatggccgtcttgttgggagactatttagatccatctctaaccttgac
accggtctctttgccttacttggagctgcatccttccttggtggtaccatgagaatgaca
gtttccctttgtgtaatactgctcgaactcactaatgatttattgttgcttccccttgtg
atgttggttctccttatctcaaaaactgtggctgataacttcaacaagggtgtctatgac
catattgtgaaattgaaaggattgccttacatggaggcccatgcagaaccttacatgagg
catttggttgcacgtgatgttgtctctagtccattggtaacttttcttggtattgaaaag
gtgggcaatatactgcatgctttgaggacaactggacataatgggttcccagtgattgat
gaaccacctttctcagatgcaccagaactgtgcggccttgtcttgaggtcacatttgctt
gttttgcttaaaggcaagaatttttcaagggaaaggatacctgctggtcaagagatcttg
cgtagatttgcagtatttgattttgctaaagcaggatctgggaagggtgtcaagttagag
gatctggatattgaagaggaagagatggagatgtatgtagatcttcatccaattagcaat
gcatccccgcacaccgtggttgagacaatgtcacttgccaaagctgcaattctctttcga
caaattggtctcaggcacatgtgtgtagtgccaataagtcaagggagacctccaattgtt
gggattttgactcgacatgacttcatgccagagcatatcttgggactctaccctcatatc
aagcctcacaagtag
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