Populus trichocarpa (black cottonwood): 18110332
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Entry
18110332 CDS
T01077
Name
(RefSeq) protein DETOXIFICATION 19 isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18110332
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
18110332
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GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
18110332
NCBI-ProteinID:
XP_006388640
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Position
11:14831487..14852910
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AA seq
485 aa
AA seq
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MLSNTSFEAAPLLERSISSVEEGEKRRLRWKKVLDVEEAKNQILFSLPMILTNVFYYLIT
LVSVMFAGHLGELELAGATLANSWATVTGFAFMVGLSGALETLCGQGFGAKMYRMLGIYL
QASCIISFIFCITISVIWFYTEPILLLLHQDAHVSMTAALYMKYLIPGLFAYGIMQNILR
FLQTQSVVMPPVVFSLVPLCIHIGIAYALVHYTALGFKGAPLAASISLWISVLMLAIYVI
CAKKFEHTWGGFSFESFHYILHDLKLALPSAAMVCLEYWAFEILVFLAGLMPSSEISTSL
IAICVNTETVAYMLTYGLSAAASTRVSNELGEGNPERAKNAMAVTLKLSVLLALLVVLAL
AFGHNIWAGLFSSSPTIAKEFASMAPFLAISITLDSVQGVFSGVARGCGWQHLAVYANLA
TFYCIGMPVACVLGFKLKLYVKGLWIGLISGLCCQAGTLLLITIRTNWTATDLSITKEKE
NPIVV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgaacacaagttttgaagctgcccctttgttggagcgtagcatcagtagtgta
gaagaaggtgagaagaggaggctgcggtggaagaaggtgttagatgtagaagaggccaag
aaccaaatcttgttttcactgcccatgattctcactaatgttttctactacttgataact
ttggtctctgtcatgttcgctggtcatctcggagagcttgagcttgctggagccaccctg
gctaactcatgggctacggtcactggttttgccttcatggtagggttgagtggagcactt
gaaacactatgtggtcaaggatttggtgcaaagatgtacagaatgctaggaatttatctt
caagcatcctgcattatatcattcatcttctgtattaccatatcggttatatggttctat
acagagccaattctgttattactccatcaagatgctcacgtttctatgactgctgctctc
tacatgaagtatctcattcctggattgttcgcatatggcattatgcagaacatcctgagg
tttcttcagacacaatctgtagtaatgccccctgtggtattctcattagtaccactgtgc
attcatatcggtattgcttatgctttggttcactatacagctcttgggttcaagggagct
ccactggcagcatcaatttcactatggatatcagtcctaatgttagccatttatgtgatt
tgtgcaaagaaatttgagcatacatggggtgggttttcatttgagtcatttcattacatt
cttcatgacttgaaactagccctgccttctgctgcaatggtatgcttagagtattgggcc
tttgagattctggtgttcctagcaggactgatgccaagctcagaaataagcacctcattg
atcgcaatatgtgtaaacacagaaactgtggcctacatgttaacctatggtctcagtgcc
gctgcaagcacaagggtgtcaaatgaattaggagagggcaatccagagagagctaagaat
gctatggctgtgactctcaagctctctgtccttcttgctcttcttgttgttctggctcta
gcatttggtcacaacatctgggctggacttttcagtagcagccctacaatagcaaaggaa
tttgcatcaatggctccctttcttgcaatttcgattactcttgattctgtgcaaggtgtc
ttctcaggggtggccaggggttgtggctggcagcacttggctgtttatgcgaacttggca
acattctactgtattggcatgcctgtagcttgtgttcttggattcaagttaaagctatat
gttaagggtttatggattggcttaatcagtggcctttgttgccaagccggtaccctcttg
ttaatcacaataaggaccaattggactgcaacagatctgtctataaccaaagagaaagag
aaccccattgtcgtctaa
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