Populus trichocarpa (black cottonwood): 18110347
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Entry
18110347 CDS
T01077
Name
(RefSeq) putative axial regulator YABBY 2 isoform X1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18110347
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
18110347
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GFIT
Motif
Pfam:
YABBY_N
Zn_ribbon_Elf1
zf-LSD1
Zn_ribbon_5
Zn_ribbon_12
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-GeneID:
18110347
NCBI-ProteinID:
XP_052311592
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Position
9:177150..184608
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AA seq
168 aa
AA seq
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MALDVVSERVCYVHCNFCNTILAVSVPSSSLLNIVTVRCGHCGNLLSVNMGASLQTLPLQ
DAQKLHLINSEDLNKDSGSSSKPNKVTAFKSAEHEPPRMSPIRRTNYFPINCQQKQPLRR
DNVFLLHITGSSRRKFKGLRLVILTSAIGKLSARQQKIGHIFHTFTLD
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggctctggacgtggtatctgaacgtgtttgttatgttcactgcaatttctgcaacacc
attttagcggttagtgttccaagcagcagcttgctcaatattgtgacagttagatgtggg
cattgtggcaatttgctgtctgtgaacatgggagcttccttacaaacactacctcttcaa
gatgcccagaaactgcaccttataaactctgaagatttgaacaaggacagtgggtcatct
tccaaacctaacaaggtcactgcttttaagtctgccgagcatgaaccaccaagaatgtcc
cccatccgccgaactaattatttccctatcaattgtcaacaaaagcagcccctgagaaga
gacaacgtgttccttctgcatataaccggttcatcaaggaggaaattcaaaggattaagg
cttgtaatcctgacatcagccatagggaagctttcagcacggcagcaaaaaattgggcac
attttccacacattcactttggactga
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