Populus trichocarpa (black cottonwood): 18111083
Help
Entry
18111083 CDS
T01077
Name
(RefSeq) putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
18111083
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18111083
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18111083
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18111083
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18111083
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
18111083
Ion channels [BR:
pop04040
]
Chloride channels
Chloride channel (CLC)
18111083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
18111083
NCBI-ProteinID:
XP_006389435
UniProt:
U7E1A6
LinkDB
All DBs
Position
18:13608327..13613255
Genome browser
AA seq
775 aa
AA seq
DB search
MATNSINGESNDDHESVTIPLLTSERSNVNSTSQVAIVGANVCPIESLDYEIAENDLFKQ
DWRSGGKIQIFQYVFMKWLLCFLIGLIVSLIGFFNNLAVENIAGLKFVVTSNMMLAKRFG
MAFLVFSVSNLTLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFSLRTLIVKIIG
SISAVSSSLFVGKAGPMVHTGACVAALLGQGGSKRFRLTWRWLHFFRNDRDRRDLVTCGS
AAGIAAGFRAPVGGVLFALEEMASWWRSVLLWRSFFTTAVVAIVLRALIDFCLSGKCGLF
GKGGLIMFDVYSASVTYHLIDVPPALALGVIGGILGSLYNFLLDKVLRIYNLINEKGIAY
KIFLACAISVSTSCLLFGLPWLASCQPCPSDASESCPTIGRSGNFKKFQCPPGHYNDLAS
LIFNTNDDAVRNLFSKNTNSEFQYSSILIFFVTCFFLSIFSCGIVAPAGLFVPVIVTGAS
YGRFVGMLVGSHSSLNHGLYAVLGAASFLGGSMRMTVSLCVIILELTNNLLLLPLIMLVL
LISKTVADAFNGNIFDLIMKAKGFPYLESHAEPYMRQLTVGDVVTGPLQVFQGIEKVGNI
VHVLRTTRHNGFPVVDEPPLSEPPVLYGLILRAHLIELLKKKAFMSAPVPTSIDALKLFS
AGDSAERGSGNGDKIEELRFTEEEMEMFLDLHPFTNASPYTVVETMSLAKALILFREVGL
RHLLVMSRISGRSPVVGILTRHDFMPEHILGLHPLLIRSRWKRLRIRVPRVFKFF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaattctatcaatggagaatcaaacgacgaccacgagtctgttaccattcct
cttcttacctctgaaagatcaaatgtcaactccacttctcaagttgccatcgttggagct
aatgtctgccccattgaaagtcttgattacgagattgctgagaatgatctctttaaacaa
gattggaggagtggtgggaagatacaaatattccagtatgtgttcatgaagtggttgctt
tgtttcttgattggcctgattgttagccttattgggttttttaataatcttgctgtggaa
aatattgctggcttgaagtttgtggtcacctccaatatgatgctggccaaaaggtttggg
atggcttttcttgtgttctcagtttctaatttgactcttaccctttttgcatctatcatc
accgcttttatagcaccagctgctgctggttcaggtattccagaagttaaggcttacctg
aatggtgtggatgcgccaggaatattttccttgcgaaccttgattgttaagattattgga
agcatatccgcagtttcctcatctctttttgttggaaaggcagggccaatggtgcacact
ggagcatgtgttgcagcattgcttggtcagggtggatccaaaagatttagattaacatgg
agatggcttcattttttcagaaatgaccgagaccgacgagatcttgtaacatgtgggtca
gctgctggaattgctgctggcttccgcgccccagttggaggtgtgctgtttgcacttgaa
gaaatggcatcttggtggagaagtgtccttctttggagatctttcttcacaacagcagta
gttgcaatagtgctgcgggctctgattgatttttgtttaagtggaaaatgtgggttattt
ggcaaaggagggctcataatgtttgatgtgtattcagcaagtgttacataccacctcatt
gatgttcctcctgcgcttgcccttggagttataggaggcatattgggaagtttgtataac
ttccttttagacaaggttcttcggatttacaacctcatcaacgagaaaggcattgcttac
aaaatttttcttgcttgtgcaatttctgtttccacatcctgtcttctttttggactaccg
tggcttgcctcttgccaaccttgtccatctgatgcatctgaatcctgtccaacaataggc
cggtctggtaacttcaagaaatttcaatgtcctcctggacattacaatgatctggccagc
cttatatttaatacaaatgatgatgctgtaagaaatcttttcagcaagaacaccaactcc
gagtttcaatattcgtcaattctcatattctttgtgacctgcttttttcttagcatcttt
agctgtgggattgttgcccctgcgggtcttttcgttcctgttattgtgactggtgcatct
tatggacgttttgttggaatgctagttggttcgcactcaagtcttaatcatggcctctat
gctgtcctaggtgctgcttcatttttaggtggatctatgaggatgacagtttctctgtgt
gttattatcctagaattgaccaataatctgttgctgctacccttgataatgcttgttctt
cttatttccaagaccgtggctgatgctttcaatggtaatatttttgatcttatcatgaaa
gcaaagggctttccttacctagagtctcatgccgagccctatatgaggcagttgactgtt
ggtgatgtagtaactggtccactccaggtctttcagggcatcgagaaggttggcaacata
gtacatgttctgagaactacaaggcataatggatttcctgtggttgatgagcctccactt
tccgagcctccagttctttatggtcttatcctccgtgctcatcttattgaattgctaaag
aagaaagctttcatgtccgctccagtgccaacaagcattgatgccttaaagctgttctct
gctggtgattctgcagagaggggctcaggcaatggagacaagatagaggaactacgattt
actgaagaagagatggagatgtttttagatctacatccatttactaatgcttcaccatac
actgttgtggagacaatgtcactggccaaggctctcatacttttccgagaagttggtttg
aggcatttattggtgatgtccaggatatctggtaggtcccctgttgtgggtatactgact
aggcacgatttcatgccagaacatatacttggtctgcatcctttgctgattagaagcagg
tggaaaagattaagaatccgggtgccgcgtgtattcaaattcttctag
DBGET
integrated database retrieval system
