Populus trichocarpa (black cottonwood): 18111101
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Entry
18111101 CDS
T01077
Name
(RefSeq) CRS2-associated factor 1, chloroplastic
KO
K27709
CRS2-associated factor 1, chloroplastic
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18111101
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18111101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
DUF3686
Hemopexin
Motif
Other DBs
NCBI-GeneID:
18111101
NCBI-ProteinID:
XP_006389456
UniProt:
U7DZE9
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Position
6:complement(15689730..15692473)
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AA seq
731 aa
AA seq
DB search
MALKLFPTPFPIFAPPSPNPSHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRR
FTSANNIVTNYDPKNAAEVDISFFKSTGTPSSPSSPSIPGKKSKYSKPLKKTHPAFLPKI
TRVPLPRNNAKPPIDRKADIKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAP
FGPITMPRPWTGRAPLPPSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTR
EEILGDPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVC
TVDMDNVCQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQ
RAPEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGS
DFRKIGAKLRDLVPCVLISFECEHILMWRGRDWKSSFTKPVNDGDEAKNSSIDGATSATP
LLEGLQNETFSVKDASTLNLKTSRMDAEDQGEDLSQKDIDETFAAKIFISTSTEIYESKT
TPDNDDSSAVTKSEAMRIASGSEVILDDRGYIDEMLITTSVESDTTLERIGNMEKLQNVS
EGSHVSELAKLNESYTQGVLELLKQAVEIGSAVVLDANLDADAVYQKAVAFAQSAPPGPV
FRRQPRNTVVQKSEMQENGELEVKQVTSFSKMGGGSERKSSKVRRKYFNEQYVDSVPQGS
LRVDELAKLLA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaaattatttccaaccccgttcccaatctttgcaccaccgtctccgaaccca
tcccaccgtccgtccaccgaggtccacttctctcgatggttcaacgccaatgcagacaaa
ttcaaccaacgctaccgctcccaacaagaaatcgaagaagatatcagccgccgtcgccgc
ttcacttccgccaacaacatcgtcactaattacgacccgaaaaacgccgctgaagtagat
atctcttttttcaaatccactggcacaccttcctctccttcctctccttctatcccgggt
aagaaatctaaatactccaaacccttgaaaaaaacccacccagcttttcttcccaaaatt
accagagtgcccctaccgcgaaacaacgccaaaccccccattgacaggaaagcagacatc
aagctaagcgaagacggcgtctcctatgtaatagacggcgcaccgttcgagttcaagtac
agctacacggagacgccgaaggtgaagccgttgaaactaagggaggcgccgtatgcgccg
tttgggcccatcacgatgccaaggccttggactgggcgtgccccgttgccgcccagcaaa
aagaagctgagagagtttgattcgtttgttttgccccctccggataagaagggagtcaag
ccggttcaggcaccgggtccctttttgcccggggcgggccctaggtacgcaaagactaga
gaggagatattaggtgatcctttgacacaagaggagattcaagagttggttgatggatgc
ttgaaagcgaagcgacaattgaatatggggagagatggtttgacgcataacatgttggat
aatatacatgcgcattggaagcggaggagagtgtgtaaaatcaaatgcaaaggagtatgt
actgtggatatggacaatgtgtgtcagcaattagaggaaaggactggagggaagatcatt
tacagaaagggaggggtgttgtatcttttccgaggaagaaactacaactatcgatttcga
ccccgctttcctcttatgttgtggaaacctgttacgcctgtttatccaaggttgattcaa
cgagctccggagggtctaacattgcaagaagcatctgggatgcggaataaagggcggaaa
ctgataccaatatgtaaactagggaaaaatggtgtgtaccgtgatttagtgagaaatgtc
agagaggcgtttgaagagtgtgaattggtccgaataaattgtcaagggatgaatggaagt
gattttaggaaaattggagccaaactcagggaccttgtcccatgtgtgctgatctcattt
gaatgcgagcacatcctcatgtggaggggaagagattggaagtcctccttcacaaaacca
gtaaatgatggtgatgaagctaagaattctagcattgacggtgcaacttctgccacacca
cttttggagggcctacaaaatgaaactttctcagtaaaggatgccagcacactgaattta
aaaacgtccaggatggatgctgaagatcaaggagaggatctatcccaaaaggacatagat
gagacatttgcagctaagatttttatttcaacctcaacagaaatctatgaaagtaaaacc
acaccagataatgatgacagttctgctgttaccaagtctgaagccatgagaattgcaagt
ggcagtgaagtaatattggatgatagagggtatattgatgaaatgctaattaccacgtcg
gtggaatctgataccacactggaaagaattgggaacatggaaaagctccaaaatgtttca
gaaggttcccatgttagtgaactggcaaaattgaatgaatcttatacgcagggagtttta
gaattgttgaaacaagctgttgagattgggagtgcagttgtcctagatgcaaatttggat
gctgatgcggtttaccaaaaggcagttgcctttgcacagtctgctcctcctggtcctgtt
tttaggcgccaacccaggaacacagtggttcaaaagagcgagatgcaagaaaacggggaa
ttggaagttaaacaagtcacaagcttttccaagatgggaggaggtagcgagaggaagagt
tctaaggttagaagaaaatatttcaatgaacaatatgtagattctgtaccacaaggaagc
ctaagagtggatgaacttgctaaactgttggcatga
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