Populus trichocarpa (black cottonwood): 18111124
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Entry
18111124 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18111124 isoform X1
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00511
Other glycan degradation
pop00600
Sphingolipid metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
18111124
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
18111124
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
18111124
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Gene cluster
GFIT
Motif
Pfam:
DUF608
Glyco_hydr_116N
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
18111124
NCBI-ProteinID:
XP_052307278
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Position
3:complement(495765..504462)
Genome browser
AA seq
988 aa
AA seq
DB search
MVRRDTRISTSLQALYSLQFQSSNQTVYTSDPTSLQSPGKMFERKISGNGFDEEQGEPSN
YPVDKVDAGKPAPLTWQRKLDGDETVLSQFTLSLQEKLLMAPIGIRLWRHIREENARKRG
GFYMDPFAKRNVTSCLGIPVGGIGSGSIGRSYKGEFQRWQLFPRICEEKPVLANQFSIFV
SRSNGKKYSSVLCSRSPDVLEEAAGSGIESWDWNLKGNNSTYHALYPRAWTVYEGEPDPE
LRVVCRQISPIIPHNYKESSFPASVFTFKLYNSGKTSADVTLLFTWANSVGGVSEFSGQH
LNSTKMMEDGVHCALLNHKTANGLPSVSFAIAAQETPVVHVSKCPCFVISGNSQGVTAKE
MWNEVKEHGSFDNLNSPGKLVPSEPGSSIGAAVAATSTVPPDGVCTVTFSLAWDCPDVKF
GSGRTYHRRYTKFYGTHGDAAANIAHDAILEHGLWESEIEAWQRPILEDKRLPEWYAGTL
FNELYYLNSGGTVWTDGSPPFRSLATIEGSKFSLDRAGSNLGHQGDTAVDILGRMTSALE
EIHTPLTTNSAFGTNLLQEGEENIGQFLYLEGIEYHMWNTYDVHFYASFAFIMLFPKLQL
SIQRDFAAAVMMHDPSMMPLLHDGQRVPRKVIGAVPHDIGIHDPWFEVNAYNLHNTDRWK
DLNPKFVLQVYRDVIATGDKKFARAVWPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDT
WSLSGVSAYCGGLWVAALQAASALAWEVGDKDSAEYFWCRFQKAKIVYGKLWNGSYFNYD
NSGGINSSSIQADQLAGQWYARACGLSPIVDEDKARCALEKIYNYNVLKVQDGKRGAVNG
MLPDGTVDLSCLQSREIWSGVTYAVAATMIQEGLTDMAFHTASGVYEAVWAEQGLGYSFQ
TPEGWNTTDQYRSLCYMRPLAIWAMQWALSRPELHRQEMKLQAGEDSVPVHHAGFAKVAR
FLKLPHAESSKSHFQSLFEYATTKFGYS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaagagatactaggatctccacttccttgcaagccctttatagcctgcagttt
cagtcttcaaaccaaaccgtctacacaagcgatcccacttctctccagtctccaggaaag
atgtttgagagaaagatatcagggaatggttttgatgaagaacaaggagaaccttcaaat
tatccggtggacaaggttgatgctgggaaacctgcaccactgacctggcagcggaaatta
gacggggatgaaactgtcctttcgcagttcactttaagtttgcaagagaaacttttaatg
gcccctataggtattcggctatggcgtcatatccgagaagaaaatgccagaaaaaggggg
ggtttttatatggatccatttgctaagcgcaatgtgacatcttgtcttggcattccagta
ggcggtattggttcaggaagcattggaagaagttacaaaggtgaatttcagcgttggcaa
ctgttccctagaatatgcgaagaaaaacctgttttagcaaatcaattttctatttttgtt
tcgcgctcaaatggtaaaaaatattccagtgtactgtgctcgaggagtccagatgtgctt
gaagaagctgcaggctcagggattgaatcttgggactggaatctgaagggaaataattcc
acatatcatgctttataccccagggcttggactgtatatgagggcgaacctgatccagaa
ctcagggttgtttgtcgtcaaatttcacctattattcctcataattacaaagagagcagc
ttccctgcatcagtttttaccttcaagctctacaattctgggaagacttctgcagatgtc
accttgcttttcacatgggcaaattctgttggaggggtttctgaattttctggtcagcac
ctcaactcaacaaaaatgatggaggatggtgtacattgtgcacttctgaatcacaagaca
gcaaacgggcttccctcggtatcctttgcaatcgctgcacaagagactcctgttgttcat
gtctcaaaatgtccttgcttcgtgatatctggaaactcacaaggtgtcacagccaaagaa
atgtggaatgaagtaaaagagcatgggtccttcgacaacctcaactcacctggaaagctg
gtgccttcggaaccaggatcatctattggggcagccgttgcagcgacttcaacagtccca
ccagatggtgtatgtacagttactttttcattggcatgggactgccctgacgtaaaattt
gggagtggaaggacttaccacaggcgttacacaaaattctatggtactcatggagatgct
gctgcaaatattgcgcatgatgctattctagagcatggcctttgggagtcagagatagaa
gcctggcaaagaccaattcttgaagacaagagacttcctgaatggtatgctggcactctc
tttaatgagctctattatcttaattcaggggggacagtttggacagatggatcccctcca
ttccgtagcttagcaactattgaaggaagtaagttttctctcgacagggcaggttccaac
ctgggccatcaaggtgatactgctgttgacattcttggaaggatgacttctgcacttgag
gaaatccacactcctttaacaaccaattctgcttttggaactaatttactacaagaagga
gaagaaaatattggtcaattcctttatctagaagggatcgagtatcacatgtggaacacc
tatgatgttcacttttatgcatctttcgccttcattatgctgtttcccaaacttcagctc
agcattcaaagggactttgcagcggcagttatgatgcatgatcccagtatgatgccactg
ctacacgatgggcagcgtgtccccagaaaggttattggagctgtccctcatgacattggg
atccatgacccatggtttgaagtaaatgcctataacctccacaacactgatcgctggaaa
gacttgaatccaaaattcgttctccaggtttacagggatgtgattgctactggagacaag
aagtttgcacgagctgtttggccatcagtttatgttgcaatggcttatatggatcagttt
gacagggatggtgatgggatgattgagaacgacggctttcctgatcagacatatgatacg
tggtctttgtcaggggttagtgcatattgtggtgggctatgggtggcagccttacaggct
gcatcagccctggcatgggaagtaggagacaaggattcggcagaatatttttggtgtagg
tttcagaaggcaaagattgtgtatggcaagttatggaatggttcttacttcaattatgac
aacagcggtggtatcaatagctcatccattcaagctgatcaattggccggacaatggtac
gcacgagcatgcggactttcacctattgttgacgaggacaaagctcgatgtgcactggag
aagatttataattacaacgtcctgaaggtgcaggatgggaaacgaggggccgtaaatggg
atgctacctgatggaacagttgacttgtcatgcctacagtcaagagaaatatggtccggg
gtcacatacgcagttgctgcaaccatgatccaggaaggcttgacagatatggcatttcat
actgctagtggagtctacgaggctgtgtgggctgaacaaggacttggatattcctttcaa
actcctgaaggttggaacaccactgaccagtatagatccttatgctacatgcggcctttg
gccatctgggcaatgcagtgggccttatcaagaccggaacttcaccggcaggaaatgaaa
ttacaagccggggaagactctgtgcctgtgcaccatgctggcttcgccaaagttgctcgt
tttctcaagttgcctcatgccgaatcatctaaaagccatttccaatccttgtttgagtat
gctaccaccaagtttggttacagttaa
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