KEGG   Populus trichocarpa (black cottonwood): 18111134
Entry
18111134          CDS       T01077                                 
Name
(RefSeq) ras-related protein RABD1
  KO
K07874  Ras-related protein Rab-1A
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18111134
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    18111134
   04031 GTP-binding proteins [BR:pop04031]
    18111134
Membrane trafficking [BR:pop04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    18111134
 Autophagy
  Other autophagy associated proteins
    18111134
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18111134
  Exosomal proteins of other body fluids (saliva and urine)
   18111134
  Exosomal proteins of colorectal cancer cells
   18111134
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    18111134
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase SRPRB LANC_like Dioxygenase_N TniB
Other DBs
NCBI-GeneID: 18111134
NCBI-ProteinID: XP_024453238
LinkDB
Position
3:532348..535957
AA seq 201 aa
MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTSKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG
NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMSNQPTAN
NSTGTVQMKGQPIEQKNNCCG
NT seq 606 nt   +upstreamnt  +downstreamnt
atgagcaacgaatatgattatctgtttaagcttttgctaatcggagactcatctgttggg
aaatcgtgtctgcttctcagatttgctgatgactcttatgtagacagctatatcagtacc
attggtgttgattttaaaatcaggactgtggagcaggatggaaagacaagcaagctgcag
atttgggatacagctggacaggagcgcttccggaccataacaagcagttattatcgagga
gcacatgggataattatagtctatgatgttaccgagatggagagcttcaacaatgtcaag
cagtggttgaatgagattgatagatatgcaaatgatagtgtctgcaaacttttagttgga
aataagtgtgatctagttgagaacaaggttgtggacacacaaacagcaaaggcatttgca
gatgagcttggcattcctttcctagagacaagtgctaaagactcgataaatgtagagcaa
gcattcttaaccatggctggtgaaattaagaaaaagatgagtaaccagccaactgctaac
aattcaacaggaactgttcagatgaaggggcagccaatcgagcagaagaacaactgttgc
ggttag

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