Populus trichocarpa (black cottonwood): 18111173
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Entry
18111173 CDS
T01077
Name
(RefSeq) probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X1
KO
K03453
bile acid:Na+ symporter, BASS family
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
18111173
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Motif
Pfam:
SBF
LapA_dom
Motif
Other DBs
NCBI-GeneID:
18111173
NCBI-ProteinID:
XP_006389537
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Position
3:816488..820524
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AA seq
428 aa
AA seq
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MSLSLLLTSTRPPLLDRTHFKITHANPKKLTSSSHPSFRNLPALILSSSSGSGSCSCSGH
EESGHLPVSPPKPTSLDWQQNVLSTAASLYPLYVTAGGILACFNPSAFSWFVKRGPASYS
LSLGLIMLAMGLTLELKDLIALFMQRPLSILFGCVAQYTIMPAFGLIVSKALGLPPSFSV
GLILLGCCPGGTASNVVTLIAQGDVPLSIVMTGCTTLGAVLLTPFLTKILAGTYVPVDAI
GLSISTLQVVVAPILLGSYMQSKIPAAVKTVTPFAPLFAVLASSLLACSVFSENVVHLKS
SMVAASLPSDASLILRIQSIFSGEMGTIILAVLLLHLAGFFVGYISAAIAGFKEPQRRAI
SIEVGMQNSSLGVVLAASHFTSPMVALPPAMSAVIMNIMGSSLGFFWRYTNPSDSKDTHS
PKIDGSEK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctctctccttctcacgtcaacacggcccccactccttgatagaacccacttc
aagatcactcacgctaaccccaaaaaactcacctcttcttcacatccaagtttcagaaac
ctgcccgcgttgatactcagctctagctctggctctggctcttgctcttgctctggccat
gaggaatctggtcacctacctgtgtccccaccaaaacccacctccctggattggcaacag
aacgtgttatccactgcagcaagcttgtatcctctctatgtgactgctggtgggattctt
gcttgcttcaacccgtctgctttttcttggtttgtgaagagaggtccagcttcttatagt
ttgtctcttgggctcatcatgttggctatgggtctcactttggagcttaaggacttgatt
gccttgtttatgcagaggcctctctctatactatttggatgtgttgctcaatatacaatt
atgccagcttttggactgatcgttagtaaagcgttggggcttccaccttctttttcagtt
ggattgatattgctcggttgttgccctggaggtaccgcctctaatgtggtgaccttaatt
gctcaaggggatgttccactttctattgtaatgacagggtgcactactcttggtgcagta
cttctcactccatttctgacaaaaattctggctggaacttatgttcctgtggatgccatt
ggtctttccatcagcactctacaggtggttgttgctcctattctgctaggttcatatatg
cagagcaaaattcctgcagctgtgaaaactgtcacgcctttcgcgccactgtttgctgtt
ttagcttcatcgctgcttgcttgcagtgtgttctcagaaaatgttgttcatcttaaatcc
tcaatggttgctgcgtcattgccatctgatgcctctctaattcttcgcattcagtcaata
ttctctggtgaaatgggaactataatacttgctgttctgctgttacatttggctggcttc
tttgttgggtatatatcagcagcaattgctgggtttaaagagccgcaacggcgggcaata
tcgattgaggttggaatgcaaaattcctccttaggtgtggtattagcagcatcacatttc
acttcacccatggttgcgttacccccagctatgtctgctgtgatcatgaacatcatgggc
agtagtctaggcttcttctggagatacaccaatccctctgattcaaaggacacacacagc
cccaagattgatggaagtgaaaaatga
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