Populus trichocarpa (black cottonwood): 18111197
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Entry
18111197 CDS
T01077
Name
(RefSeq) pectinesterase isoform X1
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00040
Pentose and glucuronate interconversions
pop01100
Metabolic pathways
Module
pop_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18111197
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
18111197
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Motif
Pfam:
Pectinesterase
PMEI
ANIS5_cation-bd
Endotoxin_N
Motif
Other DBs
NCBI-GeneID:
18111197
NCBI-ProteinID:
XP_052307559
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Position
3:complement(449524..472354)
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AA seq
572 aa
AA seq
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MTQAGQYTSMSKKNKRLVLAIFASFLLVATIIAIAIGVNSHKNSTKNDAAHALLMASCNS
TRYPDLCYSAATSFPDASGGDPKAVILNNINATIDAINSKKIKANSILSTKDLTEQQKTA
LKDCRQNYDSSLADLEKVWGALTRNPNNQLLQQQSYADQLTTQVTSCKTNEDSCLDGFSH
KSLLRELREWFHDPSKDDAGNMCSNTLALIKKLIENTKAIANRLKTTSRKLKEEDDSAEG
WPEWLSVTDRRLFQSSLLTPDVVVAADGSGKYRTVSAAVAAAPKHSAKRYIIKIKAGVYR
ENVEVPSEKTNIMFLGDGRKKTIITASRNVVDGGTTYHSATVAVVGQGFLARDITFQNTA
GASKYQAVALRVESDFAAFYKCGMLAYQNTLYVHSNRQFFTNCYIAGTVDFIFGNSAAVF
QDCDIRARRPNPGQTITITAQGRSDPNQNTGIVIQKSRIGATPDLQHARSNFSAYLGRPW
KEYSRTVIMQSSISDVISPAGWREWKGRFALNTLHFAEYENSGAGAGTAGRVPWKGYKVI
TDATEAQAFTARNFITGSSWLKSTTFPFSLGL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagccggccagtacacttccatgtccaagaaaaacaagaggcttgtccttgct
atttttgcttctttcttactagttgccactataattgccattgccattggcgtaaattct
cacaaaaactccaccaaaaatgatgctgctcatgccttactgatggcctcatgcaactcc
acaaggtatcctgatttgtgctactcagcagctaccagtttccctgatgcttccgggggt
gatcccaaggcagttattctgaacaacataaacgcaactatagatgctattaatagcaaa
aagatcaaagcgaatagtatcctatccaccaaagatcttacagaacaacaaaagaccgct
ctcaaggattgtaggcagaattacgacagcagtcttgccgatctagaaaaggtttgggga
gcgctcacacgcaaccccaacaatcaacttcttcaacaacaatcatacgctgatcagctc
acaactcaagtcacttcttgtaaaacaaatgaagactcgtgtttggatggtttctctcat
aaatcgcttttgagggaattgagggagtggtttcatgatcccagtaaagatgatgctgga
aatatgtgtagtaatacattggcattgatcaagaagttgatcgaaaacactaaagccatt
gccaataggctcaagaccacaagcaggaagctcaaggaggaggacgatagcgctgaaggg
tggcctgagtggttgtcggtaacggacagacggctgttccaatcatcattgctgactcca
gacgtggtggtggcagctgatggcagtgggaagtataggacagtgtcagctgcagttgct
gctgcacctaagcacagcgctaagaggtatattatcaaaatcaaggcaggtgtctacagg
gaaaatgtggaagttccaagtgagaaaactaacatcatgtttcttggagatggaaggaaa
aaaactatcatcacagcaagtaggaatgtggttgatggcggcacaacctaccattctgcc
actgttgccgtggtgggtcaaggattcctagccagagacataaccttccagaacacagcc
ggcgcctccaagtatcaagccgtggcactacgagttgagtctgactttgcagcgttctac
aaatgtggcatgctggcctaccaaaacaccctctatgtccactcaaaccgtcagttcttc
acaaactgctacatagcaggcactgttgatttcattttcggcaattctgcagctgttttc
caagattgtgacatccgtgctcgccgtcccaatccaggacaaacaatcacgataactgcc
caagggaggagtgatcctaatcaaaacactggcattgtaattcagaagtctagaatcggt
gctactcctgatctacagcatgccaggagtaatttctctgcgtatcttggtagaccctgg
aaggagtattcaaggactgttatcatgcaatcatccataagtgatgtgataagcccagcc
ggatggcgtgagtggaagggcagattcgcacttaacacattacattttgcagagtacgaa
aacagtggggctggtgccggaaccgccggaagggttccctggaaaggatacaaggtgatc
accgatgcaactgaggctcaagcttttactgctcgcaacttcatcactggtagtagctgg
ttgaaatccactaccttcccattctctcttggtctctga
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