Populus trichocarpa (black cottonwood): 18111259
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Entry
18111259 CDS
T01077
Name
(RefSeq) protein DETOXIFICATION 40 isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18111259
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
18111259
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GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
18111259
NCBI-ProteinID:
XP_024436672
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Position
11:complement(165654..171321)
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AA seq
516 aa
AA seq
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MSSNSIENTIDDSSTGNDEIHQPMLLDKQPSQEPVISSELEDVLSDTSLSYFKRLQRATF
IELKTLFQLAGPAVVVYLLNNVISMSTQILCGHLGNLELAASSLGNNGIQIFAYGLMLGM
GSAVETLCGQAYGAHKYEILGIYLQRSTVLLMATGIPLMMIYIFSKSLLILLGESDTIAS
AAAIFVYGLIPQIFAYAANFPIQKFLQAQSIIFPSAYISVGVLVVHLLLSWVAIYKLGWG
LLGASLVLSLSWWLLVGAQFVYILVSRNFKHTWKGFSLQAFSGLWEFFKLSIASAVMLCL
ETWYYQILVLIAGLLKDAEIALDSLTVCMTISGWVFMISVGFNAAASVRVSNELGAGHPK
SASFAVVAVTLSSFIIALALAIVLLLLRHVISYAFTGGSTVADAVAELSPFLAISILLNG
VQPVLSGVAVGCGWQAFVAYVNVGCYYFIGIPLGCVMGFKLDFGVKGIWSGMIGGTLIQT
IILLWVTFRTDWNKEVEKATNRLNTWDNIKQPLLKD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaacagtattgaaaacacaatagatgactccagtactggaaatgatgagatt
catcaacccatgttgctagacaagcaaccatcccaggagccagtaatcagttctgaactt
gaagatgtactatcagatacaagtttgtcatactttaagcgactccaaagagccaccttc
attgagttaaagacactcttccagctagcaggaccagcagttgtggtttacttgctcaac
aacgtgatttccatgtcaacccaaatcttatgtggtcatcttggcaatcttgagcttgct
gcttcctcacttggcaacaatggaatccaaatttttgcctatggccttatgttagggatg
ggaagtgcggtggagacactatgtggccaagcatatggggcacacaagtatgaaatattg
gggatatatcttcagagatcaacagtactccttatggcaactgggattccacttatgatg
atatacatattttccaagtctctcttgatcttactaggtgaatcagacaccattgcatca
gcagctgcaatatttgtgtatggccttattccacagatatttgcttatgctgccaatttt
cccatacaaaagttcttacaagctcaaagcataattttccctagcgcatacatatcagtt
ggtgtccttgtggtgcatcttttactgagttgggttgcaatttataaattgggatggggg
ttgcttggtgcctcattggttttgagcttgtcatggtggcttttagtgggggcacagttt
gtttacattctagtaagccgaaatttcaagcacacatggaagggatttagtttacaggcc
ttttctggcttatgggaattcttcaagttatcgatcgcatcagctgttatgctatgcctt
gagacttggtactaccagattcttgttttgattgctggtctactcaaagatgctgaaatt
gccttggactctctgacagtttgcatgacaatatcaggatgggtgttcatgatctcagtt
ggtttcaacgcagcagcaagtgtaagagtaagcaacgaattaggagctggacatcccaaa
tcagcatcatttgctgtagtggctgtaactttaagctccttcattatagctctggcccta
gctattgttctgctcttacttcgccatgtgatcagctacgccttcactggtggttccaca
gttgccgatgctgtcgcagaactctctcctttcttggccatctctattttactaaatgga
gtccagcctgttttatctggtgtagctgttggatgtggatggcaagcatttgttgcatac
gtcaatgttggatgctactattttattggtatcccattgggatgtgttatgggcttcaag
ttggactttggtgttaagggaatatggtctgggatgataggaggcacacttattcaaact
atcatattattatgggttacctttcgtacggactggaataaagaggttgagaaagcaaca
aatcggttgaatacatgggacaacatcaagcagcctcttttgaaggattaa
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