Populus trichocarpa (black cottonwood): 4929677
Help
Entry
4929677 CDS
T01077
Symbol
rbcL, Poptr_cp030
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00630
Glyoxylate and dicarboxylate metabolism
pop00710
Carbon fixation by Calvin cycle
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
Module
pop_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pop_M00532
Photorespiration
pop_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
4929677 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
4929677 (rbcL)
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
4929677 (rbcL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
4929677
NCBI-ProteinID:
YP_001109509
UniProt:
A4GYR8
A0A0A0V020
LinkDB
All DBs
Position
Pltd:55716..57143
Genome browser
AA seq
475 aa
AA seq
DB search
MSPQTETKAGVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYL
NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFVEKDRSR
GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMDTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaggtgttggattcaaggctggtgttaaagattat
aaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattc
cgagtaactcctcaacctggagttccgcccgaggaagcaggggccgcagtagctgctgaa
tcttctactggtacatggacaactgtgtggaccgacgggcttaccagtcttgatcgttat
aagggacgatgctacgacatcgagcccgttgctggagaagaaaatcaatttattgcttat
gtagcttaccccttagacctttttgaagaaggttctgttactaacatgtttacttccatt
gtgggtaatgtatttgggttcaaagccctacgcgctctacgtctggaggatttgcgaatt
cctcctgcttatgttaaaacttttcaaggcccacctcatggtatccaagttgaaagagat
aaattgaacaagtatggtcgccccctattgggctgtactattaaacctaaattggggtta
tccgctaagaattacggtagagcagtttatgaatgtctacgcggtggacttgattttacc
aaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattt
tgtgccgaagcactttataaagcacaggctgaaaccggtgaaatcaaagggcattattta
aacgctactgcaggtacatgcgaagaaatgatcaaaagggctgtatttgccagagaattg
ggagttcctatcgtaatgcatgactacttaacagggggattcaccgcaaacactagtttg
gctcattattgccgagataatggtttacttcttcacatccatcgcgcaatgcatgcagtt
attgatagacagaaaaatcatggtatacactttcgtgtactagctaaggcattacgtatg
tctggtggagatcatattcactctggtaccgtagtaggtaaacttgaaggggaaagagac
ataactttgggttttgttgatttactgcgtgatgattttgttgaaaaagatcgaagccgc
ggtatttatttcactcaagattgggtctctctaccgggtgttctacccgtggcttcgggg
ggtattcacgtttggcatatgcctgctctgaccgagatctttggagatgattccgtacta
caattcggtggaggaactttagggcacccttggggaaatgcacccggtgccgttgctaat
cgagtagctctagaagcatgtgtacaagctcgtaatgagggacgtgatcttgctcgtgag
ggtaatgaaattatccgtgaagctagcaaatggagccctgaactagctgctgcttgtgaa
gtatggaaggagattaaatttgaattccaagcaatggatacgttgtaa
DBGET
integrated database retrieval system
