Populus trichocarpa (black cottonwood): 4929705 Help Entry 4929705           CDS       T01077                                  Symbol rpoA, Poptr_cp055 Name (RefSeq) RNA polymerase alpha subunit   KO K03040   DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Organism pop  Populus trichocarpa (black cottonwood) Pathway pop03020   RNA polymerase Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     4929705 (rpoA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pop03021]     4929705 (rpoA)    03400 DNA repair and recombination proteins [BR:pop03400]     4929705 (rpoA) Enzymes [BR:pop01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      4929705 (rpoA) Transcription machinery [BR:pop03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      4929705 (rpoA) DNA repair and recombination proteins [BR:pop03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       4929705 (rpoA) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD HHH_XRCC3_RpoA RNA_pol_L_2 Motif Other DBs NCBI-GeneID:  4929705 NCBI-ProteinID:  YP_001109534 UniProt:  A4GYU3 LinkDB All DBs Position Pltd:complement(78948..79967) Genome browser AA seq 339 aa AA seqDB search MVREKVRISTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT CITRAKSKKIPHEFSTITGIQESIHEILMNLKEIVLRSNLYGTHDASICVKGPGCVTAQD IILPPSVEIIDNTQHIASLREPIDLHIGLEIERNRGYCMKPPKNFQDGSYSIDAVFMPVR NANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFHLE KNQHKITLPLFAFHDRLAKLRKNQKEIALKSIFIDQLELAPKIYNCLKRSNIHTLWDLLK NSQEDLMKIEHFRIEDVKHIFGILKIEKHFTINLPKNKF NT seq 1020 nt NT seq  +upstreamnt  +downstreamnt atggttcgagagaaagtaagaatatctactcggacactacagtggaagtgtgttgaatca agagctgacagtaagcgtctttattatggacgttttattctgtctccacttatgaaaggt caagccgacacaataggcattgcgatgcgaagagctttgcttggagaaatagaagggaca tgtatcacacgcgcaaaatctaagaaaataccacacgaattttctactataacgggtatt caagaatcaatacatgaaattttaatgaatttgaaagaaattgtattgagaagcaattta tatggaactcatgacgcgtctatttgtgtcaagggtcctggatgtgtaactgctcaagac atcatcttaccgccgtctgtggaaatcattgataatacacaacatatcgctagcttaagg gaaccgattgatttgcatattggattagaaatcgagaggaatcgtggctattgtatgaaa ccgccaaaaaactttcaagacggaagttattccatagatgctgtattcatgcctgttcga aatgcgaatcatagtgttcattcttatggaaatgggaatgaaaagcaagagatacttttt ctcgaaatatggacaaatggaagtttaactcctaaagaagcacttcatgaagcctcccgg aatttgattgatttatttattccttttctacatgcagaagaagaaaacttccatttagaa aaaaatcaacacaagattactttacccctttttgcttttcatgatagattggctaaacta aggaaaaatcaaaaagaaatagcattgaaatctatttttattgaccaactcgaattggct cctaagatttataattgcctaaaaaggtccaatatacatacattgtgggaccttttgaag aacagtcaagaagaccttatgaaaattgaacattttcgcatagaagatgtaaaacatata tttggcattctaaaaatagaaaagcatttcacaattaatttaccaaagaataaattttaa

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