Populus trichocarpa (black cottonwood): 7453660
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Entry
7453660 CDS
T01077
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
pop04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
7453660
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
7453660
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7453660
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7453660
03036 Chromosome and associated proteins [BR:
pop03036
]
7453660
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
7453660
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
7453660
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
7453660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
MrpR_N_CB
COQ7
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
7453660
NCBI-ProteinID:
XP_002306198
LinkDB
All DBs
Position
4:complement(19273352..19276593)
Genome browser
AA seq
462 aa
AA seq
DB search
MGILRNSPKASPRKKSTSLQLLFDLEPNNSNGTKMFSSKSGKQSAFESEYGEILSIISHC
RSIFTFTDPLESPLERDIKRLKLFQLLSFVKKPIKPLPEEITRPVVSMLSANLFRPLPPS
SKQTVICELPEDEDLVSTLSPAWPHLQVAYDILLRLVLNIDPKILRCYVDEPFLVNLLSL
FQSENPRERESLKNVYHRIYSRFTFYRAFMRKSMNHVFLHYVFETEKHSGIGELLEIWGS
IINGFAVPLKEEHKLFLMRVLIPLHKGKGMQVYHRQLAYCINQFVQKEPMLGGVAVRGIL
KYWPATNCQKEVLLLGELEELVENIDPGHYRKLALPICAQISRCMNSLNSQVAERALYVW
NNEQFVKMASSMMKEVFPVVVESVEKNLKWHWSESVKQLTENVKTMIEETDPNLYDSCLE
EMAHKEYLAGQEDIKRREKWERLELAAAKNHQFFPATTMSRY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtattctcagaaactccccaaaagcctctccaagaaaaaaatctacctcccttcag
ctcctctttgatttggagcccaacaatagcaatggcaccaagatgttcagttccaaaagt
ggcaagcagtctgccttcgaatctgaatacggagaaatcttgtctattatatctcactgc
cgctctatttttactttcactgatcctttggagtctcccttggagcgagatattaagcga
ttaaagcttttccagctcctttctttcgtgaaaaaacccataaagccactacctgaagaa
attacacgcccagttgtgtccatgctatcggccaaccttttcaggcctctccctccatct
tccaaacaaaccgtcatctgcgaattacctgaggatgaagaccttgtttccactctctcg
cctgcttggccacacctgcaagttgcttacgatattctgcttcgactagtcctcaatatt
gatcccaaaattctccgttgttatgttgatgaaccttttcttgtcaaccttctgtccctc
tttcagtctgaaaacccgagagaacgcgaaagtctgaagaacgtttaccaccggatatat
tccaggttcactttttacagggcattcatgaggaaatcgatgaaccatgtcttcttgcac
tatgttttcgagacagagaagcattctgggatcggtgagctgcttgagatatggggaagc
atcatcaatggtttcgctgtcccactaaaagaggagcacaagctgttcttgatgagagtg
cttatccctttgcacaagggcaaggggatgcaagtctaccacaggcaactggcgtattgt
attaatcaatttgtgcagaaggaaccaatgcttggtggggtggctgtcagagggatctta
aagtattggcctgccacaaattgtcagaaagaagttctactccttggtgaattggaggaa
ttggtagagaatatcgatcccggtcactatagaaagttagctttgcctatatgtgcccaa
atttcaagatgcatgaatagtttaaactcacaggtcgcggagcgtgcactatacgtgtgg
aacaacgagcaatttgtgaagatggcatcatcaatgatgaaagaggtgtttcctgtggtt
gtagagagcgtggaaaagaacctgaaatggcactggagcgagagtgttaaacaactgaca
gaaaatgtgaagacaatgatagaagaaacggatccaaatttatatgacagttgcctggaa
gaaatggcccacaaagagtacttagctggccaggaagatatcaaaaggagagaaaaatgg
gagagattagaattggcagcagccaagaatcatcagttttttccagccacaacaatgtca
cgttattga
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