Populus trichocarpa (black cottonwood): 7453812
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Entry
7453812 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RGLG2
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7453812
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7453812
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7453812
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
7453812
NCBI-ProteinID:
XP_024442618
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Position
15:11049660..11054615
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AA seq
452 aa
AA seq
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MGGILSTRTRSRYPSSSHSWSHNSYPQSPYAQPSQEHTAYQHYAPPPQSYGDRAPXSRRL
ERKYSRIDDNYNSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGDE
QNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEFSVFFPDERFCNGFAEXLTQYR
ELAPQLRLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIAEGQVTRSVDTERGQLSPQEKG
TVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTKIMSKNMDRSR
KEAEFSLSALMEIPSQYKATLELNILGATRGKGIDRVPLPPPQYGAGADSFRKGIDRVPL
PSPRYGAGADSFRNPEPAQSSSTRPSAPSSERHDGTAFPGSSASDNHLCPICLTDPKDMA
FSCGHQTCCDCGQDLQLCPICRSTIHTRIKLY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggagggatactctccacacgtacaagatcacgctatccttctagttcacattcatgg
agtcataacagctatccccagtcaccatatgctcaaccaagtcaagaacatacggcatac
cagcactatgcacctccacctcagagctatggtgatcgagcaccanattctaggagattg
gagagaaagtattcaaggatagatgataattataatagcctggagcaggttactgatgcc
ctggcacgtgctggcttggagtcttcaaatcttattgtcggtattgatttcacaaaaagc
aatgagtggacaggtgcaaggtcattcaacaggagaagcctgcatcacattggagatgag
caaaatccctatgagcaagcaatatctatcattggaaaaacattatcttcctttgatgag
gataacttaattccctgttttggatttggagatgcatcaacgcatgatcaagaattttca
gttttttttccggatgagaggttttgtaatggatttgcagaangtttgacacaatataga
gaattggccccccagctacgacttgcaggaccaacatcttttgcccctatcattgaaatg
gctattacaatagttgagcaaagtggcggccagtaccatgttttacttataatagctgag
gggcaggtgacaagaagtgttgacactgagcgtggccaactaagcccgcaggaaaaggga
actgttgaagcaattgtgaaagctagtgagtaccccctgtccattatattagttggggtt
ggagatggaccatgggacatgatgaaggaatttgatgataacatccctgcccgggcattt
gacaatttccagtttgtgaattttacaaaaataatgtcaaagaacatggaccgatccaga
aaagaagcagagttttctctttctgctttgatggaaataccttctcagtataaagcaaca
ctagagcttaatattttgggtgctactagagggaagggcatcgatagggttcctcttccc
cctccccagtatggtgctggtgcagattcattcaggaagggcatcgatagggttcctctt
ccctctccccggtatggtgctggtgcagattcattcagaaacccagaacctgctcaatca
agcagcacccgtccaagtgcgccttcttctgaaagacatgatggcacagcatttcctgga
agttctgcttctgataatcatctttgtcccatttgcctcaccgaccctaaggatatggcc
tttagttgtggacatcagacatgctgtgactgtggtcaagatctccagttatgccccatc
tgtcgaagcaccatccacaccagaataaagctctattaa
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