Populus trichocarpa (black cottonwood): 7453833
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Entry
7453833 CDS
T01077
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7453833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7453833
Ion channels [BR:
pop04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
7453833
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2532
IQ
Motif
Other DBs
NCBI-GeneID:
7453833
NCBI-ProteinID:
XP_024442449
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All DBs
Position
15:complement(1327978..1335366)
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AA seq
708 aa
AA seq
DB search
MNQPQEKFVRFQDWKSEKTTEGRYSASNGIYPGKIRTTISSVSEKVQRGLESGSASFRRI
SKSLKSHSFNSEFASKQKILDPQGPFLQRWNKIFVLSCVIAVSLDPLFFYVPVIDDKKKC
LSLDNTMEITASVLRSFTDIFYILHIIFEFRTGFIAPSSRVFGRGVLVEDTWAIAKRYLS
SYFLIDILAVLPLPQVVILIIIPKMGGSSYLNTKNLLKFVVIFQYVPRFVRIYPLYKEVT
TSGILTETAWAGAAFNLFLYMLASHILGAFWYLFSIERETNCWRKACGKNCGCKPELLFC
DRDVVGDVTFLDGYCPIQTPNETIFNFGIFLDALQSGVVLSSMDFPQKFFYCFWWGLQNL
SSLGQNLQTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRIKRRDAEQ
WMSHRLLPDNIKERIRRYEQYRWQETRGVDEETLVHNLPKDLRRDIKRHLCLALLMRVPM
FEKMDEQLLDAMCDRLKPALYTEESYIVREGDPVDEMLFVMRGKLLTMTTNGGRTGFFNS
EYLKAGDFCGEELLTWALDPHSSSNLPISTRTVRTITEVEAFALMADDLKFVASQFRRLH
SKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLRQEENRLQDALAKASASSPSL
GATIYASRFAANALRALRRGSNRKSRVPDRVPPMLLQKPAEPDFTAEE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaccacaagagaagtttgtgaggtttcaagattggaaatcagagaaaactact
gaaggtcggtattctgcaagtaatgggatatatccaggaaaaattagaacaacaataagc
tcagtttcggagaaggttcaaagaggattggaatctggttctgcaagctttagaaggatt
tcaaaatcattaaaatcacattcattcaacagtgagtttgcttccaagcagaaaattctt
gacccacaggggcctttccttcaaaggtggaacaagatattcgtattatcatgcgtgatt
gctgtttcactggatcctttgtttttctatgtccctgtgattgatgataagaagaaatgt
ctttctttggacaacacgatggagattacagcaagtgttttgcgctcttttacggacatc
ttttatatactacatattatatttgaattccgcactggattcatcgctccttcttctcgg
gtatttggaagaggtgttttggttgaggatacttgggcaatagctaagagatatctatca
tcatatttcttaattgacattctggcagtccttccactcccacaggtggtgattttaatt
atcattccaaaaatgggcggctcaagttatttgaatacaaagaacttgttaaaatttgtt
gttatcttccagtatgttccaaggtttgtgcgaatctatccattatataaggaagttaca
acttctggcatccttaccgaaactgcatgggctggagctgcatttaatctgtttctgtac
atgcttgcgagtcatatacttggagccttttggtatttgttctcaatagaacgagaaaca
aattgttggagaaaagcttgtgggaaaaattgtggatgcaagcctgaacttttgttttgt
gatagagatgttgttggagatgtcacatttctggatggttattgcccgatacaaacacca
aacgaaacaatcttcaattttggaatattccttgatgcccttcagtctggtgttgttttg
tcgtccatggattttccacagaagttcttttactgtttttggtggggcctgcaaaatctg
agttctcttggtcaaaatcttcaaacaagtacctatgtttgggaaatctgctttgcagtt
ttcatttctatctccggcttggtactattttcatttctcatcggaaatatgcagacatat
ttgcaatccacaactacaagattggaggaaatgagaatcaaaagacgagatgcagagcag
tggatgtcccatcgcttgcttccagataatataaaggagcggattaggcggtatgagcaa
tatagatggcaagaaactagaggtgttgatgaagagacccttgtccataatcttcccaag
gaccttagaagagacattaagcgtcacctctgcttggctttgctcatgagagtgccgatg
tttgaaaaaatggatgaacaattactagatgctatgtgtgaccgtcttaagccagcatta
tacacagaggagagctacattgttcgtgagggtgacccggttgatgaaatgctctttgtt
atgcggggcaagctattgaccatgaccaccaatggtggaagaactggcttcttcaactct
gagtacctcaaggctggtgacttttgtggagaggaacttctcacatgggctttagatccc
cactcctcatctaatctgcctatctcaactagaacagttcgaaccattacggaagttgaa
gccttcgctctaatggccgatgacttgaaatttgttgcttctcaattccggcggctccac
agtaagcagctccggcacactttcaggttttactcacagcagtggaggacatgggcagcc
tgttttatacaggctgcatggcgccgttatagtaaaaagaagctcgaagagtctcttcgg
caagaggaaaacagactacaagatgcattagccaaggctagtgcgagctcaccaagttta
ggtgccacaatatatgcctccagatttgctgctaacgctttgcgtgctctacggcgtggt
agcaatcgcaagtcaagggtaccggatagagttccaccaatgctgctgcagaagccagca
gagcctgattttactgctgaagaatga
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