Populus trichocarpa (black cottonwood): 7453863
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Entry
7453863 CDS
T01077
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7453863
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
7453863
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7453863
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
7453863
NCBI-ProteinID:
XP_024442568
LinkDB
All DBs
Position
15:complement(4951302..4955009)
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AA seq
487 aa
AA seq
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MGVVKGVEKIRISISRPSSKMKVWMIRATTSVLLWTCVVQLTTIGEMWGPRVLKGWPSQS
ASAALQENVPSLPARVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIV
PELDKTSFWADPSEFQDIFDVEHFITSLRDEVRVLKELPSRLKQRVELGMTYTMPPVSWS
DISYYYNQILPLIQKYKVVHLNKTDARLANNHQPLELQKLRCRVNFFALRFTTQIEELGK
RVIRLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNDEEVEELTRMRYAYPWWKEKIINSDL
KRKDGLCPLTPEETALTLRALDIDPNMQIYVAAGEIYGGDRRMASLAASYPKLVRKETLL
EPSDLRFFQNHSSQMAALDYLVALESDIFVPTYDGNMAKVVEGHRRFLGFKKTILLDRRL
LVDLIDRYTNGSLTWDEFSYYVKESHADRMGGPTKRLVILDRPKEEDYFYSNPEECLQSS
EDPLSST
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagttaaaggagtagaaaagataaggattagtatatcaaggccgtcgtcgaaa
atgaaggtgtggatgataagggcaacgacgtcggttttgttgtggacatgtgtggttcag
ttgacgacaatcggtgagatgtggggtcctagggttttgaaaggttggccttcccaatct
gcctctgccgccttgcaagagaatgttccttctctccctgctcgcgttttgcctccaaag
agggtttataagaacaatggatacttaatggtctcgtgcaatggaggtcttaatcaaatg
agagctgcgatatgcgatatggttgctattgctagatatttgaatgttacacttatagta
ccggaactggataaaacctccttttgggctgatcccagtgagttccaagacatatttgat
gtggagcattttatcacatcattaagggatgaggttcgcgtattgaaagaattgccttcc
aggctgaagcagagagtggaactggggatgacttataccatgccaccagttagttggtcg
gatatttcttactattataaccagattcttcctttgatacagaagtacaaagttgtacat
ctaaataaaactgatgctcgacttgccaataatcaccaacctctagagctgcagaagttg
cgctgccgtgtgaatttttttgctctgagattcaccactcaaatagaggagttgggtaag
agagttataaggcttctaaggcaaaatggtcccttcttggtactccaccttcgatatgaa
atggacatgctggcgttttctggctgtactcaaggttgcaacgatgaagaggtggaagaa
ttgacaagaatgagatatgcttatccttggtggaaagaaaaaataataaattcggatttg
aagaggaaagatgggttgtgtcctttgacacctgaggaaacagctctcacgttgagggca
ctggacattgatccaaatatgcaaatatatgttgcagctggtgaaatatatgggggtgat
aggagaatggcaagtcttgctgcatcttatccaaaactggtcagaaaggaaacactgttg
gaaccatcagaccttaggttcttccagaatcactcatctcaaatggcagcattggattat
cttgttgcattggagagtgatatttttgtccctacctatgatggaaacatggctaaagtt
gttgaaggccaccgcagattccttggctttaagaaaacaattttactggacagaaggctt
ttggttgatctgatagatcgatacactaatggatcgctgacctgggatgaattttcgtat
tatgtaaaagaatcccatgcagatcggatgggcggcccaacaaaaaggctggtgatcctt
gacaggcctaaagaagaggattacttctattcaaacccagaagagtgtttgcagtcatca
gaggatccattgagcagcacatga
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