KEGG   Populus trichocarpa (black cottonwood): 7453919
Entry
7453919           CDS       T01077                                 
Name
(RefSeq) GTP-binding protein YPTM2
  KO
K07874  Ras-related protein Rab-1A
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7453919
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7453919
   04031 GTP-binding proteins [BR:pop04031]
    7453919
Membrane trafficking [BR:pop04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    7453919
 Autophagy
  Other autophagy associated proteins
    7453919
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7453919
  Exosomal proteins of other body fluids (saliva and urine)
   7453919
  Exosomal proteins of colorectal cancer cells
   7453919
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    7453919
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase MMR_HSR1 GTP_EFTU SRPRB Gtr1_RagA Septin FeoB_N ABC_tran LANC_like Dioxygenase_N AAA_29 AAA_22 AAA_16 AAA_5 Enterochelin_N
Other DBs
NCBI-GeneID: 7453919
NCBI-ProteinID: XP_002301234
UniProt: B9GP70
LinkDB
Position
2:10395280..10398443
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG
NKSDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRMASQPAMN
NAKPSTVQLRGQPVEQKGGCCSS
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatccagagtatgattatttgttcaagctccttctcattggtgattctggtgttggc
aaatcctgtcttcttctaagatttgctgatgattcatatattgagagttatataagcacc
attggggtcgactttaaaatacgtaccgtggagcaagatgggaaaaccataaaactccaa
atctgggatactgctgggcaagaaagatttagaacaattaccagcagctactaccgcggg
gcacatggtatcatagttgtttatgatgtgacagaccaagagagcttcaacaatgtcaag
cagtggctcaatgaaattgatcgatatgctagtgataatgtgaacaaacttctggttgga
aacaagtctgatctcactgcaaataaagtagtgtcatacgagacagcaaaggcttttgct
gatgagattggcatacctttcatggaaactagtgcaaaagatgccactaatgtggaacaa
gctttcatggccatggctgctgcaatcaaggatagaatggcgagccaaccagccatgaac
aacgcaaaaccttcaactgtgcagctcagaggacagcctgttgaacaaaagggaggctgc
tgctcgtcttga

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