Populus trichocarpa (black cottonwood): 7454033
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Entry
7454033 CDS
T01077
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7454033
03036 Chromosome and associated proteins [BR:
pop03036
]
7454033
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
7454033
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
7454033
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
7454033
microRNA pathway
RISC loading complex
7454033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
7454033
NCBI-ProteinID:
XP_002318338
UniProt:
B9I4Y6
LinkDB
All DBs
Position
12:3332350..3340173
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AA seq
1062 aa
AA seq
DB search
MVRKRRTEIPQSGGESSESQETDTGRGAQPPAERSGPPQQGGGGGGYQGGRGWGPQSQQG
GRGGGYGGRGRGGMQQQQYGGAPEYQGRGRGQPQQGGRGYGGGRPGGGRGGPSSGGFRPP
APELHQATPAPYPAVVTTQPTPSEASSSMRPPEPSLATVSQQLQQLSVEQEGSSSQAIQP
LPASSKSVRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVM
EQLVKLYRESHLGKRLPAYDGRKSLYTAGALPFQAKDFKITLIDDDDGSGGPRREREFKV
TIKLAARADLHHLGLFLRGQQADAPQEALQVLDIVLRELPTARYCPVGRSFYSPDLGRRQ
SLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRPLSDS
DRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTLKSVVEYFYETY
GFVIQHPQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQERE
KDIMQTVYHNAYHNDPYAKEFGIKISDKLASVEARILPPPWLKYHDTGREKDCLPQVGQW
NMMNKKMVNGGRVNNWICVNFSRNVQDSVARGFCYELAQMCQISGMDFALEPLLAPVSGR
PEHVERVLKNRYHEAMTKLRPHSKELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCL
TKHVFKMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGE
DSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIKELLI
SFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRH
HTRLFANDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLW
DENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIAS
GMAGGRGGAGGGPRPTRGPGANAAVRPLPALKENVKRVMFYC
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagagaagaaccgaaattcctcaaagtgggggtgagagttctgagtcgcag
gaaactgatactggtcggggtgcccagcccccagctgagaggagtggtccacctcaacag
ggaggaggtggaggaggataccaaggtggaaggggttggggtccccagtctcagcaagga
ggtcgtggaggtgggtatggtggacgaggccggggagggatgcaacaacagcaatatggt
ggagcccctgagtaccagggccggggaagagggcaacctcagcaaggaggtcgaggatat
ggtggtggtcgtcctggaggtggccgcggagggccatcttcaggtggatttagaccacca
gcacccgagctgcaccaagctaccccagctccttatccagctgtggtgaccactcagccc
acgccatctgaggcaagttcttcgatgcgaccaccagagccatcgctagcaactgtatcg
cagcagctgcagcaactatctgttgagcaagaaggttcttctagccaggcgattcagccg
ctgccagcctcaagtaaatcagtgaggttccctcttcgaccaggaaaaggtagcactggc
attaggtgtattgtaaaggccaatcacttctttgctgagctaccagataaggatttgcac
caatatgatgtcaccataacaccagaggtcacatcaaggggtgttaatcgagctgtaatg
gaacaactggttaaactgtaccgggaatctcatcttggaaagcgtcttcctgcttatgat
ggacggaagagtctatatactgccggagcacttccttttcaggcgaaagatttcaagatc
accctcattgacgatgatgatggatcaggcgggccaaggagagagagagaattcaaagtt
acaatcaaattggctgctcgtgctgacctgcaccacttgggactttttttgcggggacag
caagctgatgcgcctcaggaagcccttcaagttcttgatatagttctgcgtgaattgcct
actgctaggtattgtcctgtgggtcgatcattttattcccctgacctaggaaggagacaa
tcacttggtgagggcttggagagttggcgtggtttctatcaaagtattcgtcctactcag
atgggactatcgctgaacattgatatgtcatccacggccttcattgagccactgccagtc
attgattttgtgactcagttattaaatcgtgacgtttcctctagaccgttgtctgattct
gatcgtgtaaagattaaaaaggcactaagaggcgtcaaagttgaagttacacaccgtgga
aatatgcgcagaaagtaccgtatttctggcttaacatcacaggcaacacgggagctgact
ttcccggttgatgaaagaggaaccctgaaatctgtcgtggagtacttctacgaaacctat
ggttttgtaattcaacaccctcaatggccttgtctacaagtaggaaatcaacagagacct
aattatttgcctatggaggtctgcaagattgttgagggtcagaggtactccaaaagattg
aacgagagacagataactgcattgttgaaggtgacctgccagcgtcctcaggaaagggag
aaagatattatgcagacggtttatcacaatgcataccacaatgatccatatgcaaaggag
tttggtatcaaaatcagtgataagcttgcttcagttgaagctcgcattctgcctccccca
tggcttaagtatcatgacacaggcagagagaaggattgtcttcctcaagttgggcagtgg
aatatgatgaataagaaaatggtcaatgggggaagagtgaataattggatctgcgtcaat
ttttcacgaaatgtgcaagacagtgtggctcgaggattttgctatgaacttgcacaaatg
tgtcaaatttctggcatggactttgctcttgagccattgctggctcctgtcagtggtcgt
cctgagcatgtagaaagggttttgaaaaatcgataccatgaagcaatgaccaagctccgg
ccccatagcaaggaacttgacttgcttattgtgattctccctgacaacaatggttctctt
tatggtgatttgaagcgtatttgtgagacagatcttgggcttgtttcccagtgctgtttg
acaaagcatgtgttcaaaatgagcaagcaatatcttgctaatgtggctttgaagataaat
gtgaaggttggaggaaggaatacagtacttgtggatgcaatatctagacgtatccctcta
gtcagcgaccgacctactattatttttggtgctgatgttactcatcctcatcctggggag
gactcaagcccatctattgcagccgttgtggcttcgcaagattggccagaggttaccaaa
tatgctggcctggtttgtgctcaagcccaccgacaagagcttatccaagatttatataaa
acatggcaggatcctgtacgagggacagtgtctggtggcatgatcaaggagcttctcata
tccttccgtagggcaaccgggcagaagccacagcgaattatattctacagagatggtgtc
agtgaaggacagttttatcaagttttgttgtacgagcttgatgctattcgtaaggcatgt
gcttctttagagcccaattaccagcctcctgtgacatttgttgtggttcagaagcgtcat
cacacaaggctgtttgcaaatgatcaccgtgaccgcaatgctgttgacaggagtgggaat
atattgcctggtactgttgtggactcgaagatctgccatcctactgaattcgacttctat
ttgtgtagtcacgctgggattcagggcacaagccgtccagctcattaccatgtactttgg
gatgagaacaagtttactgctgatgggctgcagtccctgacaaacaatctttgctacaca
tatgcacgatgcacgagatctgtttccattgtgccacctgcatactatgctcatcttgct
gcatttcgagctcgtttctacatggagccagagacatcagacagtgaatcaattgcaagt
ggcatggctggtggtcgtggaggtgctggtgggggtcctcgtccaacacgtggacctggt
gctaatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttc
tactgctag
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integrated database retrieval system
