Populus trichocarpa (black cottonwood): 7454240
Help
Entry
7454240 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7454240 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7454240
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
7454240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
7454240
NCBI-ProteinID:
XP_024463260
LinkDB
All DBs
Position
8:14287148..14296769
Genome browser
AA seq
931 aa
AA seq
DB search
MEELEELLGGNGVGIRVSTFDYSVENHFKEMDMISKLCGEAQTDSVDEIEIQCYKSSITF
LSEWKLYKYDPRIIRFASETDNSLEKCVLSGINLPLFSSATVPKERPDVGATSLESSKDF
VMHVGGSVWALDWCPRVHERPDNHIKREFVAISAHPPESYYHRIGVPLTGRGMVQIWCVL
NVGGDEEALPMKKSKLGARYNVSKMDKSVELNRPKGRPRKKPIEESSRNEATKALVKMPK
GRPRKRPIEESPCNEATELISAKRPKGRPRKKPIEESPSNEAIEEILAPVNEATKENLAQ
VKRGGRPRKNPTNESLDSLDSSNQYVQALSVEYPQDSPGLLSIEGISQNSQDEAKQKHKV
KEQKKFTKQLFDCNTNLKTTAQSRRLNSNARKGSDSGDVACPLLLIHNEDDNVSLDINST
SSTVNYQTHENSGLNTAMPAYGSDNVSLDINPTSSIPKDADLPRVVLCLAHNGKVAWDVK
WQPCNAPPSKFQHRMGYLAVLLGNGSLEVWDVPLPHAMKSVYSSSNLEGTDPRFVKIKPV
FRCSTLKCGGIQSIPLAVEWSTSYPHDYLLAGCHDGTVALWKFSASGASGDTRPLLCFSA
DTVPIRAIAWVPSESDQESPNLILTAGHLGLKFWDIRDPFRPLWDLHPAPKLIYSLDWLP
DPRCIILSFDDGTMRLLSLARAAYDAAVNGKPSVGPKQLGMHVVNCSSFAIWSVQVSRLT
GMVAYCSADGTVCRFQLTTKAVEKDPSRHRAPHFGCGSLSEDESAIIVGTPLPDTPLPLK
KPVNDVGNNPKSKQRLSVSNKAAKIPTSDDPPLALCYGDDPGMDHGSDETLTATKSKRKP
KSKSGSKQMEGEDQALVCIDDEQDVKQKGGGKEGAGNVVESIPPKMVAMHRVRWNMNKGS
ERWLCSGGAAGIVRCQEIKMFDADICLARKR
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactagaagaattattaggaggcaatggtgttggcattagagtttcaacattc
gattattcagttgagaatcactttaaagaaatggacatgatttctaaactttgtggagaa
gcacaaactgattccgtggatgaaattgaaattcagtgctataagtcctctatcactttt
ttgagtgagtggaagctttataagtacgacccgagaataattaggtttgctagtgaaacg
gataattctctggagaagtgtgttctcagtggaataaatctaccgctgttctcatctgca
actgttcctaaggagagaccagatgttggtgccacttctctagaatccagtaaagatttt
gtgatgcatgttggagggtctgtttgggcattggattggtgtcctagggttcatgaaagg
cctgacaatcatatcaaacgcgagtttgttgctatttctgcccatcctcctgaatcttac
tatcacagaataggtgtaccacttactggcagaggcatggtccagatatggtgtgtttta
aatgtcggtggggatgaggaagcacttccaatgaagaaatcaaaactgggagctcgatac
aatgtatccaagatggacaaatcagttgaattaaacaggccaaaaggaagacctagaaaa
aagccaatagaagaatcatccagaaatgaagccacaaaggctttagttaagatgccaaaa
ggaagacctagaaaaagaccaatagaagaatcaccctgtaacgaagccacggagttgatt
tcagctaagaggcctaaaggaagacctagaaaaaagccaatagaagaatcacccagtaat
gaagccatagaggagattttagctccagttaatgaagcgacaaaggagaatttagctcaa
gttaagaggggaggacggcctagaaagaacccaacaaatgaatctcttgatagtttggat
agcagcaaccagtatgtccaagctctctctgttgaatacccacaagattcacctggactg
ctttctatagaaggtatttctcaaaacagccaagacgaggccaaacaaaaacacaaggtg
aaagaacaaaaaaaattcaccaaacaactatttgattgtaatacaaatcttaaaactact
gcacaaagtagaagattgaatagtaatgcaaggaagggaagtgattctggtgatgttgca
tgtccactgttattgattcataatgaagatgataatgtttctttggatatcaactctaca
tcttcaactgtaaactaccaaacacatgagaattctggactcaacactgcaatgccagct
tatggttctgataatgtttctttggatatcaatcctacttcttccattccgaaggatgct
gatttgccaagagttgtattatgcctagctcacaatggaaaagttgcatgggatgtcaaa
tggcagccttgtaatgcacccccttccaaattccagcatcgcatgggttatcttgctgtc
ttgctgggaaatggatctttggaagtatgggatgttcctctcccccatgctatgaaatca
gtttattcttcgtctaatttagaaggtacagatcctcgctttgtaaagataaagccagta
ttcagatgttcaactctgaagtgtggaggtatacagagcatccctttggcagtagagtgg
tcaacttcataccctcatgattacctacttgctggatgccatgatggaacagttgctttg
tggaaattctctgcaagtggcgcatctggtgatacaaggcctttgctttgtttcagcgca
gatacagttcctattagagcaattgcatgggtcccatctgaaagtgaccaagagagtcca
aatcttatcctcactgctggacatttgggcctgaagttttgggacatacgtgatccattc
cgacctttgtgggacctccatccagcaccaaaactcatatatagcctggattggctgccg
gatccaagatgtataattttatcctttgatgatggaacaatgagactcctcagcctggca
agggctgcatatgatgctgccgtcaatggaaaaccttctgttggaccaaaacaactaggg
atgcacgttgttaattgttcttcctttgctatctggagcgttcaagtgtcaaggcttaca
ggcatggttgcatattgcagtgcagatggtactgtttgccgcttccagctcacaacaaaa
gcagtggagaaagatccatcgagacatagggccccacattttggttgtgggtccttgagt
gaggatgaatcagctattatagtgggcactccattaccagatactcctttacctttgaag
aagccagttaacgatgttgggaacaatccaaaatccaagcagcgtttgtctgtgtcaaat
aaggccgcaaaaattcctacttcagatgatccaccattagctctttgctatggtgatgat
cctggtatggatcatggatcagatgaaacattgacagctacaaaaagcaagaggaaacca
aaatcaaaaagtgggagtaagcaaatggaaggagaggatcaagcattggtatgcattgat
gacgagcaagatgtcaaacagaaaggtggcggaaaggagggagctgggaatgtagttgaa
agcatcccacctaaaatggttgcaatgcatagagttagatggaatatgaacaaaggtagt
gagagatggctctgctctggtggagcagccggaatcgtacggtgtcaagaaatcaaaatg
tttgatgctgatatatgcttggcaaggaagagatag
DBGET
integrated database retrieval system
