Populus trichocarpa (black cottonwood): 7454392
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Entry
7454392 CDS
T01077
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7454392
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Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
Motif
Other DBs
NCBI-GeneID:
7454392
NCBI-ProteinID:
XP_002316954
UniProt:
B9I058
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Position
11:16360006..16362514
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AA seq
611 aa
AA seq
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MPEAPKNTLKPSDYNLAEKNKKSLQFIEDVTSNADEAQKKVLEEILSRNAHVEYLQRHGL
NGQTNRETFKKVMPVINYEDIQPDINRIANGDASPILCSKPISEFLTSSGTSGGERKLMP
TIVEELGRRSLLYSLLMPVMSQFVPDLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKS
THFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIR
FLEKYWKFLANDIRTGIIDPQITDPSIREAVMKILKPDAKLADFIEAECSKESWQGIITR
LWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPICKPSEVSYT
LIPTMAYFEFLPVNRNNGGINSVSRPKSLKEKEQQELVDLVDVKLDQEYELVVTTYAGLY
RYRVGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLIPFDATL
AEYTSYADTTTIPGHYVLFWELSLSGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSI
GPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKFAPIVELLNSRAVSRYFSPKCPK
WVPGHKQWNKN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggcaccaaaaaacactttgaaaccctctgattacaaccttgctgagaagaac
aagaaatcccttcagttcattgaagatgtgacctcaaacgctgatgaggcccagaagaag
gttcttgaagaaattctttctcgcaatgctcatgttgagtatttgcaaaggcatggtctt
aatggccagactaaccgtgagactttcaagaaagtcatgcccgtgattaattatgaggat
atccagcctgatatcaaccgtattgccaacggtgatgcctcaccaattctctgctcaaag
cccatttcagagtttttgacaagctctgggacctcaggaggggagagaaagttgatgcca
acaattgtagaggagctggggaggagatcactgttatatagcctgttgatgcctgttatg
agtcagtttgttcctgacctagaaaaaggcaaaggaatgtactttttgttcataaaatct
gaggctaagacacctggtggacttgtggctaggccagttctcactagttactacaaaagc
acccatttcaaggacaggccttatgacccttacactaattacacaagcccaaatgaaacc
attctttgccctgactcttaccaatccatgtattcccaaatgctttgtggtctttgccag
cacaaagaagtcctccgtgttggggctgttttcgcctctggttttattcgagcaatccgt
ttcttggaaaaatattggaagtttcttgcgaatgatattagaactggcataattgacccc
caaatcacggatccttcgatacgtgaagcagtcatgaaaatacttaaacctgatgcaaaa
cttgccgattttattgaggctgaatgcagcaaagaatcctggcaaggaatcataacaagg
ttgtggccaaacactaagtatgtagatgttattgtgacaggcaccatgtcacaatatatt
ccaactcttgattactacagcaatgggctgcctttagtctgcaccatgtatgcgtcctct
gagtgctactttggtgtcaatcttaatcctatttgcaagccaagtgaagtgtcttacacc
ctcattcccaccatggcctactttgagttcttacctgttaatagaaataatgggggcatt
aactcagtttccaggcctaaatcacttaaggagaaggagcaacaagaactggttgatctt
gtggatgtcaagcttgaccaagaatatgagcttgtggtcacaacctatgcaggtctttat
cgctatagggttggtgatgtgctacgagtggtggggttcaagaacaaggcaccccagttc
agcttcatatgccggaaaaatgtagtcttgagcattgattcagacaagaccgatgaggtt
gaactacaaagtgcagttaagaatgctgtgaaccatttgatcccatttgatgcaacacta
gctgagtacactagctacgcagataccactaccattccaggccactatgtgttattttgg
gagcttagcctcagtgggtcaacccctattcctccctcggtcttcgaggattgttgcttg
accattgaagagtcactcaatagtgtatatcgccaaggacgtgtgtctgataagtcaatt
gggccacttgagatcaagattgttgagccagggacttttgataagcttatggactatgcc
attagcttgggggcatcaatcaaccaatacaagacccctaggtgtgtgaaatttgcacca
attgttgagctcttgaactcgagggctgtgtctcgttacttcagtccaaagtgtcccaaa
tgggtccctggtcacaagcaatggaacaagaattga
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