Populus trichocarpa (black cottonwood): 7454416
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Entry
7454416 CDS
T01077
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7454416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7454416
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
7454416
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
7454416
NCBI-ProteinID:
XP_024467550
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Position
11:16723390..16725724
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AA seq
457 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtcaagactcttactggcaagaccatcacccttgaggtggaaagctca
gacactattgataatgttaaggccaagatccaggacaaggagggaatcccaccagaccag
cagaggctgattttcgccggcaagcagcttgaggatggccgcacccttgctgattacaac
atccagaaggagtccaccctccacttggtgctccgtttgagaggtggcatgcaaatcttt
gttaagacccttactggaaagaccatcaccttggaggtggagagttctgataccatcgac
aatgtcaaggctaagatccaggacaaggaaggcattcccccagaccagcagaggttgatc
tttgccggtaagcagcttgaggatggccgcacccttgctgattacaacatccagaaggag
tccaccctccacttggtgcttcgtctacgtggtggcatgcagatctttgtgaagaccctc
actggaaagaccatcacgttggaggttgagagctctgataccatcgacaatgtcaaggct
aagatccaggacaaggaaggcattcccccagaccagcagaggttgatctttgccggcaag
cagcttgaggatggccgcacccttgctgattacaacatccagaaggagtccaccctccac
ttggtgcttcgtctacgtggtggcatgcagatctttgtgaagaccctcactggaaagacc
atcactttggaggttgagagctctgataccattgataatgtcaaggccaagatacaggac
aaggaaggcattcccccagaccagcagaggttgatctttgccggcaagcagctcgaggat
ggccgcacccttgctgactacaacatccagaaggagtccaccctccacttggtgcttcgt
ctacgtggtggcatgcagattttcgtgaagactttaactgggaagaccattaccttggag
gtggagagctctgacactatcgataatgtgaaggccaaaattcaggacaaggaggggatc
ccaccggaccagcagaggttgatttttgctggaaaacagcttgaagatggaaggacactt
gctgactacaacatccagaaggagtcaacccttcacttggtgcttcggctgcgtggagga
atgcaaatctttgttaagactttgactggaaagaccatcaccctggaggtggagagctca
gacaccattgacaatgtcaaggctaagatccaggacaaggaaggaataccccctgaccaa
caaaggttgatctttgccggaaagcagttggaagatggacgcaccctagcagactacaat
atccagaaggagtccacccttcaccttgtcctccgtctccgtggtggtttttaa
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