Populus trichocarpa (black cottonwood): 7454424
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Entry
7454424 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: FHA domain-containing protein DDL
KO
K13108
smad nuclear-interacting protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7454424
Spliceosome [BR:
pop03041
]
Complex B
Other components
RES complex
7454424
Complex C
7454424
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GFIT
Motif
Pfam:
FHA
Motif
Other DBs
NCBI-GeneID:
7454424
NCBI-ProteinID:
XP_052301107
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All DBs
Position
11:16854735..16860151
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AA seq
330 aa
AA seq
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MSHSPSLPAPARDRSSQKDRSLVEKERNSTRTRSPSSRMKILRRAHAEKEGEKTRGREIE
RNYVKKGSEKGXREEYERNHRERREREVGKERRSEVEGKSSSRGRHGGRSASPLGSNRRS
RSKHRSRSPPPQSERDRNEGKNSWGAERRSSDDDNYDDSVSKMKAAEEALEAKQKKQSSF
ELSGKLAAETNRVRGITFLFIKPPYAKKPDIRWRLYVFKGGEALNEPLYIHRQSCYLFWR
ERRVVDIPTDHPSRSKKHAVIQFRQVEKERPDGMLKNQVRPYMMDLGSTNKTFINDNPIE
PQRYYELFEKDAIKFGSSCREYVQLHENSA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattctccatctcttcctgctccggcgagagacaggagctcgcaaaaagacagg
tccctcgtagagaaagagagaaattcaactcgaacgaggtctccttcgtcaagaatgaaa
atattaaggagagcccatgctgagaaagagggtgaaaaaacgaggggtagagagatcgag
aggaattatgtgaaaaagggaagcgagaagggtnngagagaagaatatgaaaggaatcac
agagaaagacgagagagggaagttgggaaggagagaaggtcagaggttgaaggaaagtct
tcttctagaggaagacatggggggcggtctgcttctccattgggatcaaaccgtcggagc
aggagcaagcataggtcccgctcaccaccgcctcaatcagagagagaccgcaatgagggg
aaaaactcttggggagctgaacgaaggagcagtgatgatgacaattacgatgattctgtg
tctaagatgaaggctgctgaggaggctttggaagccaagcaaaagaaacaatcttctttt
gagctatctggaaaactcgctgctgaaaccaatagagtcagaggcattacatttctgttc
atcaagcccccatatgctaagaaacctgatataagatggagactttatgtttttaagggt
ggtgaggctctgaatgaacccctttatatacaccgtcaaagctgttaccttttttggaga
gaaaggagggtggtagatattcctacagaccatccatctcgtagcaagaaacatgctgtt
attcaattccggcaagtagaaaaggagcggcctgatggtatgttaaaaaatcaagtaagg
ccttacatgatggatcttggaagcaccaataaaactttcattaatgataatcccattgaa
cctcagcgctattatgaactatttgaaaaggatgcaatcaaatttggtagtagctgccgt
gaatatgtacaattgcacgagaactctgcatag
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