Populus trichocarpa (black cottonwood): 7454505
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Entry
7454505 CDS
T01077
Name
(RefSeq) transcription factor LAF1-like
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7454505
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7454505
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Myb_DNA-bind_7
MCRS_N
Motif
Other DBs
NCBI-GeneID:
7454505
NCBI-ProteinID:
XP_002321912
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Position
15:14890340..14892929
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AA seq
332 aa
AA seq
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MVSCSLRTHHKVSCSLSLAHKSSTDTSDQSSFPSCGKMGCKSSDMPKLKPKPKHRKGLWS
PEEDQRLRNYVLKHGHGCWSSVPINAGLQRNGKSCRLRWINYLRPGLKRGTFSAQEEETI
LALHHMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKNLLKDEGMESLKRTKSDSSNSDIM
ELSPSPKRLKMQASSFESSMSAEKSSADINRSVPQMFESPNEPKGSSLLPKVMFAEWLSL
ESFASLGEPMDSKTTLDHNTIFQDNFLHDYLLDERAFGGEYHNSLSDGSSGDIFSSEFRF
ESQSPGNEFDFSSGEDLCSDFNLSNISDVMYI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggtcagctgttcattgcgcacccatcacaaagtctcttgctctctctctcttgcgcac
aagtcatcgactgatacttctgatcagtcttccttcccgtcctgtggcaaaatggggtgc
aagtcatctgacatgccaaagctaaagccaaagccaaagcacaggaaaggcttgtggtca
cctgaagaagatcaaaggctcagaaactatgtccttaaacatggccatggatgttggagc
tctgtccccattaatgctggcttgcagaggaatgggaagagctgcagactaagatggatt
aattacttgagaccaggattaaaaagagggacgttttctgcacaagaagaggagacaatc
ctggcccttcatcacatgttaggcaacaagtggtctcagatagcacagcatttgcctgga
agaacagataatgagataaagaatcattggcattcctatttgaagaaaaatttgctcaaa
gacgaagggatggagtctttgaaaagaacaaaatctgacagctcaaactcagacattatg
gaactttcaccatctcccaagagactcaaaatgcaagcttcaagttttgagtcatcaatg
agtgcagaaaaatcatcagctgatatcaaccggtcagttccgcagatgtttgagtctcct
aacgaacctaaaggaagctccttattaccaaaggttatgtttgcagagtggctttcactt
gaaagcttcgcgagtttaggtgagcctatggattcaaagactacacttgatcataataca
atcttccaagacaatttcttgcatgattacttactggatgaaagagcatttggcggcgag
tatcataattcactaagcgatggttcgagcggcgacatttttagttcagaattcaggttt
gagagccagagtccagggaatgagtttgattttagctctggagaggatttatgtagtgac
ttcaacttgagcaacattagtgatgtgatgtacatatga
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