Populus trichocarpa (black cottonwood): 7454741
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Entry
7454741 CDS
T01077
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7454741
Enzymes [BR:
pop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
7454741
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
7454741
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
7454741
NCBI-ProteinID:
XP_052303658
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All DBs
Position
15:12068376..12074949
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AA seq
388 aa
AA seq
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MKRKRGEKEEAAEKKMEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKT
IVDLFAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWD
VPILDKEDDVVTVWKPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLI
LARNATRADLFRQEIEAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSC
DGSPIKGKTACTKFTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENV
TNRSSEGVNADRAAHSPNNCLVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDGHE
EGLWLHCVQYSGSGWVYQCPYPDWAVPT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagagaggagaaaaagaagaagcagctgagaagaagatggaaattgtgtgg
caaacaccggctaatcctcctgagaaacacgattacatctttcgtgacgggaggcgccac
gttagaccttaccacttcgagtttatctcccatgtaaaaaaccggtgggcggggaagacg
atagtggatttatttgcggaagaattcaaaggcagaccctatgattattatgttagtgct
gttaaatgtggacggatacaagttgatggagaaatggttcctgtttcgtacattgttaaa
tcgtcgcagaagatcagccatttcgtgcacaggcatgaaccgccggtgatggcttgggat
gttcccattcttgataaagaagatgatgtcgtaactgtttggaagccagcaactgtacct
gtgcatccttgtggtcagtatcgcaagaatactgttgttggcgttctccaggcagaacat
gggttagctcccttgtttccggttcatcggctagatcggcttgtttcaggactccttatc
ttggctagaaatgctacaagggctgacctttttaggcaagagattgaagctggcaaagta
cagaaacaatatgttgcaaaggtcattggggtatttcctgaggatgagcaaattgttgat
gttaatgttaattacaatgctcgagaaggaaggagcactgtagaggtgggtaactcttgt
gatggttctcccatcaagggaaagactgcctgtacaaagtttacaaggattggcaccaat
ggcattcacagcattgttttgtgtaaaccaatcactggccgaactcatcaaatccgtgtc
catttgcaatacacaggccatcctatagccaatgacattctttatctatccgaaaatgtt
actaatcgatctagtgaaggagtgaatgctgatagagctgctcacagtccaaacaattgt
cttgtgcctgaaaataacagttctgataagtatgaagacagtaccgaagaagattttgac
attgatcctatgtgcacaaactgtccaaatttggttccaaaaggatatgatggtcatgaa
gagggtttatggctgcattgtgtgcaatattctgggtctggatgggtttatcaatgtcca
tatccagactgggcggttcccacctag
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