Populus trichocarpa (black cottonwood): 7454876
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Entry
7454876 CDS
T01077
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00280
Valine, leucine and isoleucine degradation
pop00650
Butanoate metabolism
pop01100
Metabolic pathways
pop04146
Peroxisome
Module
pop_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
7454876
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
7454876
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7454876
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
7454876
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
7454876
NCBI-ProteinID:
XP_002314006
UniProt:
B9HNI0
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Position
9:6809840..6815419
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AA seq
429 aa
AA seq
DB search
MSSLEEPLGFDKLPSMNTIERIQRFSSGACRPRADDIGMGHCWIEGRICSSSNSCEEDYE
YTRETFPWKRHTRDPCQGNRRTMSSGSKNVVSGSSCDSRYFPDHQYSSKSNDKDIRDITN
KFLKGIPKFVKIVEVGPRDGLQNEKNIVPTDVKVELIHRLVSSGLPVVEATSFVSPKWVP
QLADARDVMEAVHGLEASRLPVLTPNLKGFEAAVAAGAKEVAVFASASESFSKSNINCSI
KESLARYRAVTHAAKELSIPVRGYVSCVIGCPEEGSIHPSKVAYVAKELHDMGCFEISLG
DTIGVGTPGTVALMLEAVMAVVPVEKLAIHFHDTYGQSLPNILVSLQMGISVVDSSVAGL
GGCPYAKGASGNVATEDVVYMLHGLGVRTNVDLAKLLSAGDFICKQLGRPSGSKTAVALS
RVTADASKI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtctagaagagccgcttggttttgacaagttgcctagcatgaatactattgag
cgaattcaaaggttctcatctggtgcttgccgaccccgggctgatgatattggaatggga
cattgctggattgagggaaggatttgcagctcatccaacagttgcgaggaagattatgag
tatacaagagagacttttccttggaaaagacatacaagagatccgtgccaaggaaatcga
aggactatgagctcaggcagcaaaaatgtggtgtctggaagtagttgtgattcacgctat
tttccagatcatcaatatagttccaaatccaatgacaaagacatacgggatattacaaat
aagttcttgaaaggtataccaaagtttgtgaagattgtggaagttggtccaagagatgga
ctgcaaaatgagaaaaatatcgtgcctacagatgtaaaggttgaattgattcatagacta
gtatcttctgggttgccagttgttgaggccacaagttttgtttcgcccaaatgggtacct
cagttagcagatgcaagagatgtaatggaagcagttcatggtttagaggcctccaggttg
cctgttctgacacctaatttaaaaggatttgaagcagctgttgcagctggtgctaaggaa
gttgctgtttttgcatcagcttctgagtcattttcaaagtcaaacatcaattgtagcatc
aaagaaagtcttgctcgttatcgtgctgtaactcatgctgctaaagagctctcaattcct
gttcgtgggtatgtatcatgtgttattgggtgtcctgaggaaggatcaatacatccttca
aaagtagcatatgtggccaaagaacttcatgacatgggttgctttgaaatatccctcggt
gatacaatcggtgttggtacacctgggactgttgctctcatgcttgaagctgtaatggct
gttgttcccgttgagaagcttgctatccacttccatgatacttatgggcaatctcttccc
aatattttggtgtctctccagatggggatcagcgtagtggactcgtctgttgcgggttta
ggtggatgcccatatgccaaaggagcatcaggcaatgttgctactgaagatgttgtctac
atgcttcatgggcttggcgtgagaaccaatgtggatctggcgaaactcctctctgctggg
gatttcatttgcaagcaattaggtcgtccatctggatcaaagactgccgtggccttaagc
cgagttacagccgatgcctctaagatataa
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