Populus trichocarpa (black cottonwood): 7454879
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Entry
7454879 CDS
T01077
Name
(RefSeq) heat stress transcription factor B-4d
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7454879
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7454879
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GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7911
Motif
Other DBs
NCBI-GeneID:
7454879
NCBI-ProteinID:
XP_002314009
UniProt:
B9HNI5
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Position
9:6778435..6780216
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AA seq
272 aa
AA seq
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MAFTVDRCEEMVFTVESQKAVPAPFLTKTYQLVDDPLTDHVVSWGDDETTFVVWRPPEFA
RELLPNYFKHNNFSSFVRQLNTYGFKKVVTDRWEFANEYFRKGAKQLLSEIHRRKTISQH
HHQHYPDQATQFLQSEDHGFGWIDPPFPSPKPNVDHILTALSEDNQKLRRKNCMLLSELS
HMKNLYNDIIYFIQNHVKPVPNEQKAYNTVPKLIEPGSSCQDQTICFGVQRAKNGVLGKH
SLTFSTEESSSPVKLFGVPLIDNKRLHPEAIE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacagtggataggtgtgaagagatggtgtttactgtggagtctcaaaaggca
gttcctgcacccttcttaacaaaaacttaccagctagttgatgaccctcttacagaccac
gttgtctcttggggtgatgatgaaaccacctttgttgtgtggagacctcctgagtttgct
agggaactcctccccaattacttcaagcacaacaacttctcaagctttgtcaggcagctc
aacacctacggattcaagaaggtagtaactgacaggtgggagtttgcaaatgagtacttc
agaaaaggagcaaagcagttgctatctgagattcacaggagaaaaacaatatcccagcac
catcaccaacactaccctgaccaagcaacccaatttctccaatcagaagatcatggtttt
ggttggattgatcctccatttccatctccaaaaccaaatgttgatcatatcctaactgcc
ctctcagaagacaaccagaaactgagaaggaaaaactgtatgcttttatcagaactctcc
cacatgaagaatctctataatgacattatctacttcatccaaaaccatgtaaaaccagtg
cccaatgagcaaaaagcttacaatacagtacccaagcttatagagccgggttcttcatgt
caagatcaaaccatttgttttggcgttcaaagggctaagaatggtgttttgggtaagcat
tcattaacatttagtactgaggaatcatctagtccagtgaagctttttggagtccctctc
attgataacaaaaggctgcatccagaagcgattgaatag
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