Populus trichocarpa (black cottonwood): 7454888
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Entry
7454888 CDS
T01077
Name
(RefSeq) cysteine desulfurase 1, chloroplastic
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00450
Selenocompound metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
7454888
Enzymes [BR:
pop01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
7454888
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
7454888
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
7454888
NCBI-ProteinID:
XP_002314018
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Position
9:6645520..6650207
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AA seq
469 aa
AA seq
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MDGMALKFPSFKFLNPNTSTIRSPPLLRKFSSSSSSLPVSASSTTLREAGPASNSVSLGQ
LTRPDFPILHQKINNGSNLVYLDNAATSQKPISVLKSLQDYYESYNSNVHRGIHYLSAKA
TEKYEQAREKIAAFINAEESREIVFTRNATEAINLVAYTWGFANLKSGDEVLLTIAEHHS
AIVPWQFVAQKTGAVLKFVNLNEDEVPDVLQLKEMISRKTKLVVVHHISNTLASSLPIED
IVHWAHAVEAKVLVDACQSVPHMPVDVRDLDADFLVASSHKMCGPTGVGFLYGKSDILST
MPPFLGGGEMISDVFLDHSTYAEPPSRFEAGTPAIGEAIGLGAAIDYLQGIGMQKIHEYE
MELANYLYENLSTVPNIRIYGPKPSKGVNRAALCSFNVKNIHPTDLATFLDQQHGVAIRS
GHHCAQPLHRYLGINASARASLYFYNTKEDVDYFIHALNDTVSFFDSFK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatggccttaaaattcccttctttcaaattcctaaaccctaacacctccacc
attcgaagcccacctcttctccgcaaattctcctcctcctcttcctcacttcccgtatca
gcatcgagtactactctcagagaagcgggcccggcttccaactccgtttcactcggtcag
ttaacccgacccgacttccccatcctccaccagaagataaataacgggtcaaatcttgtt
tacttggacaacgcagctacttcacagaaaccaatttcagtgttaaaatccctgcaagat
tattacgaatcttacaattccaatgttcatcgaggaattcattacttaagtgcaaaggca
acagaaaaatatgaacaggcgagggagaaaattgcagcatttataaacgcagaagaatct
agggagattgtatttaccagaaatgccactgaagctattaatttggttgcttatacttgg
gggtttgcaaatttaaaatcaggagatgaggttttattgaccatcgcggaacaccatagt
gcgattgttccatggcaatttgtggctcagaagaccggagctgttttgaagtttgttaat
ttaaatgaggatgaagttccggatgtacttcagttgaaagaaatgatttctagaaagaca
aaacttgttgtggtgcaccatatatcaaatacactcgcttcttctcttcctattgaagac
atagtccattgggcacatgctgttgaggcaaaagttcttgtagatgcttgtcaaagtgtt
ccgcacatgccggtcgatgtccgggaccttgatgctgattttcttgttgcctcttcacac
aagatgtgtgggcctacaggcgttggatttttatatggtaaaagtgacatcttgtctacc
atgcctccatttttgggtggcggagaaatgatctctgatgtatttttggatcattccaca
tatgcagaacctccatcaagatttgaggctggaacaccagcaattggagaagcaattgga
ttaggagcagcaatcgattatttgcaaggaattggcatgcaaaagatccatgagtatgag
atggagttggctaattatctatatgaaaacctctctactgttcctaacatacgtatctat
ggcccaaaaccttccaaaggagtcaatcgtgctgcgctttgttctttcaatgtgaagaat
attcaccccacggatcttgcaacttttcttgaccaacagcatggagtagctatcagatcg
ggtcaccactgtgctcaacctctccatcggtatttaggaatcaatgcaagtgcacgtgcc
agcctctatttttacaacactaaagaggatgttgattatttcatccacgcactcaacgac
actgttagcttctttgattctttcaagtag
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