Populus trichocarpa (black cottonwood): 7454966
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Entry
7454966 CDS
T01077
Name
(RefSeq) AP-1 complex subunit gamma-2
KO
K12391
AP-1 complex subunit gamma-1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
7454966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7454966
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Others
AP-1 complex
7454966
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_2
INTS7_N
Motif
Other DBs
NCBI-GeneID:
7454966
NCBI-ProteinID:
XP_002309097
UniProt:
B9HC63
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Position
6:complement(7043671..7055919)
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AA seq
877 aa
AA seq
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MNSFFSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRTSINENDQDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIRKVPDLAENFIN
PAAALLKEKHHGVLITGIQLCTDLCKVSPEALEFLRKKHTEGLVRTLKDVVNSPYAPEYD
IAGIADPFLHVRLLKLLRALGQGDADASDAMNDILAQVATKTESNKNAGNAILYECVETI
MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAITVDAQAVQRHRATILECVKD
SDASIRKRALELVYVLVNETNVKPLTKELIDYLEVSDEEFKGDLTAKICSIVEKFSPEKI
WYIDQMLKVLAEAGNFVKDEVWHALIVVISNASDLHGYTVRALYKAFQTSSEQESLVRVA
VWCIGEYGDMLMNNVGMLAIEDPVTVTESDIVDVVEIALKHHALDLTTKAMALIALLKLS
SRFPSCSERIKDIIVHHKGSLVLELQQRSLEFNSIIEKHQNIRSTLVERMPILDEATFTT
RRAGSLPAAVSTSGGASLNLPNGVVKPSTAPLVDLLDLSDDVPAAPGSSGGDFLQDLLGV
DLSPAPTQSGTNQVQKAGTDVLLDLLSIGVPPVQSSSSTTDILSPIQNEKSPIATLDALS
SSSSPSAQATSSARAAPMMDLLDGFGPSPSKPENNGSVYPPFVAFESSSLRITFNFSKQP
GNPQTTLVQATFTNLTPNVFTDFIFQAAVPKFLQLHLDPASSNILPASGNGSITQNMRVT
NNQHGKKSLVMRTRISYKINNKDTLEEGHINNFPREL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgttcttttccggtacgcgtcttagggacatgattcgggcaatacgggcttgt
aaaacggcggcggaggaaagagctgttgtgagaaaagaatgtgctgcaattcgaacgtcg
attaatgaaaatgatcaagattatagacaccggaatttggcaaagcttatgtttattcat
atgcttggctacccaacacattttggtcaaatggagtgcttaaagttgattgcctccgcc
ggatttcctgaaaagaggatcggatatctcggcctcatgttacttcttgatgaaagacaa
gaagttctaatgctcgttaccaactcgctaaaacaagatcttaatcattcaaaccagtat
attgtgggacttgcactttgtgctttgggaaatatttgttcagcagaaatggctcgtgat
cttgcaccagaagtggaaagattgctgcaatttcgggatccaaatattcggaaaaaggct
gcattatgctctatacggattattaggaaagtcccggatctggcagaaaattttataaat
cctgcggctgccttactaaaagagaagcatcatggagtcttaataacgggaattcaactc
tgtacagatttatgtaaagtcagtccggaagccctcgagtttttgagaaagaaacacaca
gaagggttggtcagaactttaaaggatgttgttaacagtccatatgcaccggaatatgac
attgccggtatcgcggacccttttctccatgtcagattgctcaaacttttgcgtgcgttg
ggccaaggagatgctgatgctagtgatgccatgaatgacatacttgctcaggtggcaaca
aaaactgagtcaaacaaaaatgctggaaatgctattctatatgaatgtgttgaaactatc
atgagcattgaagataatggtggcctacgagtgcttgctattaatatcctgggaagattt
ttgtctaaccgtgacaataatatcagatatgttgcattaaacatgctgatgaaggctatt
actgtagatgctcaagctgtacaaaggcatcgggcaacaatcttggaatgtgtaaaggat
tcagatgcttcaatcaggaaaagggcccttgaacttgtttacgttctggtgaacgagacc
aatgtaaaacctttgacaaaagagctaattgattatctggaagtaagtgatgaagaattt
aaaggggatcttactgccaaaatttgctccattgttgagaagttctcccctgagaaaatt
tggtacattgatcagatgctcaaggttcttgctgaggctggaaactttgtaaaagatgaa
gtatggcatgcccttattgttgtgataagcaatgcttccgaccttcatggatatacagtc
agggcattgtacaaagctttccaaacatcttctgagcaggaaagccttgttcgcgtagca
gtttggtgcattggggaatacggtgacatgttgatgaataatgttggaatgcttgccata
gaggatcctgtaactgttacggagtctgacattgtggatgttgttgagattgctttaaag
caccatgccttagacctcactactaaagcaatggctctgattgctctcttaaaactttct
tcccgtttcccatcttgttctgaaaggatcaaggatataattgttcaccataaaggcagc
cttgtgcttgaattgcagcaaagatcccttgaatttaattccatcattgagaagcatcaa
aatataagatctacactggtcgaaaggatgccaattttggatgaggctactttcactaca
aggagggctggttctttgccagcagctgtttcaacttctggtggggcttcccttaatctt
ccaaatggagttgtgaagccctccacagctcctcttgtagatttacttgatctttcagat
gatgttccagcagcacccggctcttctggtggtgattttcttcaggatcttctaggtgtt
gatttgtcaccagctccaacacaatcaggcacaaaccaggttcaaaaagctggcacagat
gttctactggatctattgtcaattggagtgcctcctgtacaaagcagctcatctacaact
gacattttatcacccattcaaaatgaaaaatcaccaatagccacattagatgcactctcg
tcatcttcttcaccttctgcacaagcaacttcttctgctagagctgctccaatgatggat
ttgttggatggcttcggtcccagcccatcaaaacctgagaataatggttcagtttatcca
cctttcgtggcatttgagagcagctctttgagaataacattcaacttctcaaagcaacca
ggaaacccgcaaacaacattagtccaggcaactttcacaaacttgacacccaatgtcttc
accgattttatatttcaggcagcagttccaaagtttcttcaactgcacctagacccagct
agcagcaatattcttcctgcaagtggtaatggatccattacacaaaatatgagagttact
aataaccaacacgggaagaaatccctcgtgatgcgcacaaggatatcatacaagatcaac
aacaaagatacactggaggaaggacacataaacaatttcccgcgtgagttgtga
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