Populus trichocarpa (black cottonwood): 7455211
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Entry
7455211 CDS
T01077
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase I
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00900
Terpenoid backbone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
pop_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
pop_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7455211
Enzymes [BR:
pop01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
7455211
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
7455211
NCBI-ProteinID:
XP_002325469
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All DBs
Position
19:9063308..9066489
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AA seq
309 aa
AA seq
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MSLTSRILFTPPTTIKLSPSIPPPSAFCPLKTPSLSSNSPHPSLLRFTHITKSPSSLFAR
VFSSFNPTATTTPPTMGDAPDAGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLWEN
ILKGNALHRAFSVFLFNSKHELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIHEDALG
VRNAAQRKLFDELGIPAEDVPVDQFSPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNP
NPDEVADIKYVNQDELKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTLEEAA
DMKAIHKLT
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacctctcgcattctatttactcctcccaccaccattaaactctccccttcc
atccctcccccttctgccttttgtcctctcaaaaccccttccctctcttccaattctccc
catccatccctcctccgcttcacccatattacaaagtcgccgtcctctctattcgcgagg
gtcttttcgtccttcaaccccaccgccaccaccacccccccaaccatgggtgacgctcct
gatgctggcatggacgctgtccagagacgccttatgttcgaggacgaatgcattttagtg
gatgagaatgatcgggttgttggtcatgactccaagtataattgtcatttgtgggaaaat
attttgaagggaaatgccttgcatagagcttttagtgtgtttctcttcaactcaaaacat
gagctactccttcagcaacgctctgcgacaaaggtaacatttcccctggtgtggactaac
acttgctgcagccatcctttatatcgtgaatctgagcttatacatgaggatgcccttggg
gtgaggaatgctgcacagaggaagcttttcgatgagcttggtattcctgctgaagatgtg
ccagttgatcagttcagtcctctggggcgtatattgtacaaggcaccttctgatggaaag
tggggggagcatgaacttgattacctgctcttcattgttcgtgatgttagcgtaaatcca
aaccctgatgaggtagctgacatcaagtacgttaaccaggatgaattgaaggagcttctg
agaaaagcagatgctggcgaggaaggtttgaagttgtcaccgtggttcagactagttgtg
gacaacttcctgttcaagtggtgggaccatgtcgagaaaggaactctagaggaagcagct
gacatgaaagcgattcacaagctgacttga
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