Populus trichocarpa (black cottonwood): 7455252
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Entry
7455252 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7455252
KO
K13210
far upstream element-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7455252
03041 Spliceosome [BR:
pop03041
]
7455252
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
7455252
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7455252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
KH_BICC1_1st
Motif
Other DBs
NCBI-GeneID:
7455252
NCBI-ProteinID:
XP_024447074
LinkDB
All DBs
Position
19:11383511..11390167
Genome browser
AA seq
767 aa
AA seq
DB search
MAAEEVVAPAVIPVASDHKRKLGDLEPEVLEQAEPSPVDEQEPEVTEKADDVEDGGSPET
KRLRIDESKTDGLASENGFKGDKSDERAREETEEQSVENEQEKDDNVEPPSEEVLETTDK
EETNAVIPETDNTDQATVDGSKDEDAEKPSLEDAEQPSLEDAEKLSLEDAEEHLSEDQTT
SRKIEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDSEADSQSTTRPVELIGTLSSIR
NAEKLINAVIAEADAGGSPSLVAMGLASGAQTAGVGDQLEIPVPNEKVGLIIGRGGETIK
GLQAKSGARIQLIPQHLPEGDGSKERTVRVTGDKRQVEMAREMIMDVMNQTVRPSTLSSS
FNQQQSYRPRGPTGPAHWGPRGPHSNQKMPYDYQHRGPYPSHGSQYPPAYGDYPQHMAPR
SNYSSGWEQRPANVQGPHTHTSGYDYYSQGGHASDHPVSGPMPTPIPGPASRHSPAPVMG
GPPSQVNYSYGQSHGPDYGHQAPYSQAAPSHQSYGHGYDEPKYPYGYGSSQPAYSQAGNQ
PGYGAQQQYGKQPSFGMPSQGPPPQSYGPPRPGQPGDMSYQGPMQSSQLYGPNAPPPLQQ
QYPYASSGPMQQPYPSYGSGSGSDGYNQAQTASGPGYPQQGGQPVPTPGQPGGQAAAGYA
QGPAGGYGSYPSAQQGYPEQQAANNAGYGYQGSQDPAYGSAPAYGAPASQQGYAQPAPTQ
PSYDQSVPQSAGYGAAPATAPVGYGKTVSPQPGYPQYDSTQMYAAPR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaggaggttgtggcacctgctgtgattccagtggcgtcggatcacaagaga
aagctgggagatttagagccggaagttcttgaacaagctgagccaagtccggtcgacgaa
caggagcctgaagtgactgagaaagctgatgacgtggaggatggtggttcgcctgagact
aaacggctaaggattgatgaaagcaaaaccgatgggttagccagcgaaaatggtttcaaa
ggagacaagtcagatgaacgtgcaagggaagaaactgaagagcagagtgttgagaatgag
caagagaaggatgataatgttgagcctccatctgaggaggtactggaaacaactgataaa
gaagaaacaaatgcagttattccggagactgataataccgaccaagctactgttgatggt
tccaaggatgaggatgctgagaaaccgtctttagaggatgctgagcaaccgtctttagag
gatgctgagaaactgtctttagaggatgctgaggaacatctatctgaggatcaaacaaca
tcgcgcaaaattgaggttccgaatgacaaggttggggttctaattggtaagggtggagat
actatacgttacctgcaatataattctggagcaaaaattcaaatcacaagggattctgaa
gctgattcacaatccacaacaaggccagtggaattaatagggactttaagcagtataaga
aatgctgagaagctcatcaatgcagtcattgcagaggctgatgctgggggttccccatct
cttgtagctatgggccttgctagtggtgcacaaactgctggagtgggagatcagctggag
attccagttcccaatgagaaggttggtctaattataggacggggtggggaaaccatcaaa
ggtcttcaagccaaatctggggctcgcattcagttgatacctcaacaccttccagaaggg
gatggatctaaagaaagaacagtacgtgtaactggagataagaggcaagttgagatggcc
agagaaatgataatggatgtcatgaatcagactgtgaggccatcaactctctctagcagc
tttaaccagcagcagtcctatcgaccccgtggacccacaggcccagctcactggggtcct
cgtggtcctcattcaaaccagaaaatgccatatgattatcagcatcggggtccatatcca
tcccatggttcgcagtatcctccagcttatggtgattatcctcaacatatggccccaaga
agtaactacagttctggttgggagcaaagacctgctaatgtgcagggccctcacacacat
accagtggctatgattactatagtcaaggaggtcatgcatctgatcatccagtttctggc
ccaatgcctactcccattcctgggcctgcttctcgtcattcccctgcccctgttatgggt
ggacctccatcccaggtaaattacagctatggacagtcccatggtccagattatgggcac
caagctccctattcccaggcagccccttctcaccagagctacgggcatggatatgatgaa
ccgaagtatccttatgggtatggaagttcacagccagcttattcgcaggctggcaaccaa
ccaggctatggtgctcagcagcaatatggcaagcagccatcatttggaatgccatcacag
ggaccacctccccagtcatatggtcctcctaggcctggtcaaccaggagatatgtcttat
caaggtcctatgcaatcaagtcaactgtatggtccaaatgcaccaccaccactgcaacag
cagtatccatatgcatcgagtgggcccatgcagcaaccctatccttcttatgggtccgga
tcaggttccgatgggtataatcaggcacaaactgcatctggcccaggctatcctcagcaa
ggtggccagcctgttcctacacctggacagcctggtggacaagcagcagctggctatgcg
caaggtcctgctgggggctatgggtcatatccatctgcacaacaaggttatcctgagcag
caagctgcaaacaatgcaggttatggctatcaagggtctcaagatcctgcttatggtagt
gcccctgcatatggtgcaccagccagccagcagggttatgctcaaccagcaccaactcaa
ccaagctatgatcagtcagtcccacaatctgctggttatggagctgctccggcaactgct
ccagttggttatgggaaaactgtgtctccacagcctggctatcctcaatatgactcaacc
cagatgtatgctgcgccacgctga
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