KEGG   Populus trichocarpa (black cottonwood): 7455512
Entry
7455512           CDS       T01077                                 
Name
(RefSeq) serine hydroxymethyltransferase 1, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00260  Glycine, serine and threonine metabolism
pop00460  Cyanoamino acid metabolism
pop00630  Glyoxylate and dicarboxylate metabolism
pop00670  One carbon pool by folate
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
pop01200  Carbon metabolism
pop01230  Biosynthesis of amino acids
pop01240  Biosynthesis of cofactors
pop04981  Folate transport and metabolism
Module
pop_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    7455512
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    7455512
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    7455512
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    7455512
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    7455512
Enzymes [BR:pop01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     7455512
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 7455512
NCBI-ProteinID: XP_002315363
LinkDB
Position
10:complement(22573119..22580530)
AA seq 520 aa
MAVAMTMALRRLSSSFDKPLRPGLFKATSLYYMSSLPNEAVYEKEKPGVSWPKQLNAPLE
AVDPQVADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNE
YIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG
HLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR
LYDYARIRKVCDKQKATLLADMAHISGLVAADVIPSPFEYADIVTTTTHKSLRGPRGAMI
FFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTVEYKAYQ
EQVLSNCAKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNT
VPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVKLAVKIKAETKGTKLKDFL
ATQSAPHFQSEISKLRRDVEEYAKQFPTIGFEKETMKYKN
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcagtggcaatgaccatggcccttcgccgtctctcctcttcctttgacaagcccctt
cgccctggtctcttcaaagccacctccctctattatatgtcttctttgccaaacgaagct
gtatatgagaaggagaaacctggtgtcagctggccaaagcagctgaatgcacccttagag
gctgttgatcctcaggttgctgatattattgagctcgagaaagctaggcaatggaagggg
cttgagcttataccctcagagaacttcacttcggtatcagtgatgcaagctgtgggttct
gtcatgaccaacaagtacagtgaaggataccctggtgcaagatactatggtggaaacgag
tatattgacatggcagaatccttatgtcagaagcgtgctctggaagcatttcgcctggat
cctgctaaatggggagtgaacgtgcaatctctatctggatctccagctaattttcaagtc
tacactgcattgttaaagcctcatgaaagaatcatggcacttgatcttcctcatggaggc
catctttctcatggctatcagacagacaccaaaaaaatatctgcagtgtcaatatttttt
gagacaatgccatacagattgaatgagagcactggctatattgactatgatcagctggag
aaaagtgccactcttttcagaccaaaattaatagtagctggtgctagtgcttacgcacga
ctatatgattatgcacgcattcgcaaggtttgcgacaaacaaaaagctacactgttggca
gatatggcacacattagtggattggttgcagctgatgtcatcccgtcaccttttgagtat
gcagatatagtgactaccacaactcacaagtcacttcgcgggccacgtggggcaatgatt
ttcttcaggaaggggttaaaagaggttaacaaacaagggaaagaagtgttttatgactac
gaggacaaaatcaatcaagctgtctttcctgggcttcaaggtggtccacacaaccacaca
attgctggtttagcagttgctttgaaacaggctacaactgtagagtacaaagcgtatcaa
gagcaagttctaagtaattgtgcaaaatttgcccagagtttagttgagaaaggctacgaa
cttgtttctggaggaactgagaaccatttagttttggtgaatttgaagaacaagggtata
gatggctccagagttgaaaaggtgcttgaatctgttcacattgctgcaaacaaaaacact
gttcctggagatgtgtctgccatggttcccggtggcatcaggatgggaacgccggctctt
acttctaggggattcgttgaagaggattttgctaaggtggcagatttctttgatgccgct
gtgaagttggcagtgaagatcaaggctgaaaccaaagggacgaagttgaaggatttcttg
gctacgcagtctgctcctcactttcaatctgagatttcaaaactccgtcgtgacgtggaa
gagtacgctaagcaattcccaacaattggatttgaaaaggaaaccatgaagtacaagaat
tga

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