Populus trichocarpa (black cottonwood): 7455625
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Entry
7455625 CDS
T01077
Name
(RefSeq) serine/threonine-protein phosphatase PP2A-4 catalytic subunit isoform X1
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
7455625
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
7455625
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7455625
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7455625
04131 Membrane trafficking [BR:
pop04131
]
7455625
03036 Chromosome and associated proteins [BR:
pop03036
]
7455625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7455625
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
7455625
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
7455625
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
7455625
Membrane trafficking [BR:
pop04131
]
Autophagy
Other autophagy associated proteins
Others
7455625
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
7455625
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7455625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
IBV_3B
Motif
Other DBs
NCBI-GeneID:
7455625
NCBI-ProteinID:
XP_002309283
UniProt:
A0A3N7F9P6
LinkDB
All DBs
Position
6:20429993..20435416
Genome browser
AA seq
313 aa
AA seq
DB search
MGTNSLSSESITDLDQQIEQLMQCKPLSEPQVRTLCEKAKEILMQESNVQPVKSPVTICG
DIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYHHRITILRG
NHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPTIET
LDNIRNFDRVQEVPHEGAMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHVNSLKL
IARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRG
EPDVTRRTPDYFL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgaattcgttatcttcagaatcaattaccgatcttgatcaacagatcgagcaa
ctcatgcagtgcaagcccctctctgaacctcaggttaggacattatgcgagaaagctaag
gagatactaatgcaggaaagcaatgttcagcctgtgaaaagccctgtgacaatatgtggc
gatattcatgggcagtttcatgatcttgcagaactttttcgtattggagggaagtgtcct
gacaccaattacttgtttatgggggattatgtggatcgtggctattattctgttgaaacc
gtgacgctcttggtggcattgaaagtgcgctatcatcataggattaccattctcagagga
aaccatgaaagtcgccagattactcaagtttatgggttttatgatgaatgtctaagaaag
tatggtaatgctaatgtttggaagatcttcaccgacctttttgactatttcccattgact
gcattggttgagtctgaaatattttgtttacatggtggattgtccccaactatagagact
cttgataacataagaaactttgatcgtgttcaagaggttcctcatgaaggagccatgtgt
gatctgctgtggtctgatccagatgacaggtgtggttggggtatatcacctcgtggtgcc
gggtatacctttggccaggatatatctgagcaatttaatcatgtgaacagcttgaagttg
attgctagagcacatcagcttgttatggatggatttaattgggcacatgaacaaaaggtg
gttaccatatttagtgcacctaattattgttaccgctgtggaaacatggcctccatactg
gaagttgatgactgcaagggccacacattcatccagtttgagccagctcccaggagggga
gaacctgatgttacccgtagaactcctgattacttcctgtaa
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