KEGG   Populus trichocarpa (black cottonwood): 7455650
Entry
7455650           CDS       T01077                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7455650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7455650
   03041 Spliceosome [BR:pop03041]
    7455650
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     7455650
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     7455650
Spliceosome [BR:pop03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    7455650
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2 RRM_3 Cut8
Other DBs
NCBI-GeneID: 7455650
NCBI-ProteinID: XP_024458557
LinkDB
Position
6:complement(19797151..19801600)
AA seq 340 aa
MEDLKKRKMDEAIINGSAETLTTQDYLRSLLDPLSKPQLVDLLSRLGSQYPSIAEEIKSL
ASADPVHRKLFVRGLAWNTTSETLCAEFRMHGEIEEGSVIYDKATGKSRGYGFITYKHME
SAQSALGAPSKLIDGRMAVCNLACEGLTGATTTPDLTQRKLYIGGLSPEISSEMLLHFFG
RYGEIEEGSVAYNKDTNESRGFGFVTYKTVEAAKKAIDDPHKLLGGRTITVKLADTHKGK
TVQMQSPAPMVPVPVPIAAAGYAQPGKAPVGSGTPVGYPYHQTVASYPASSYPNPPVAPA
PYPTQSQVSYAPVSAKKELLGLSSTPPVGMGGYPYYYPKQ
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggaagacttgaagaagagaaagatggacgaggcaatcatcaatggttctgccgaaaca
ttaaccacacaagattatcttcgctcactgcttgaccctcttagtaaaccccagcttgtc
gatcttctttctagactagggtctcaatatccttcaattgcagaagaaattaaaagtctt
gccagtgcggatccagtccatcgaaagctttttgttcgtggcttggcctggaataccact
tcagaaaccttgtgtgctgaatttcgaatgcatggtgagatagaagaagggtcagtgatc
tatgacaaagcgacaggaaagtcacgtggctatggtttcattacgtacaagcatatggaa
tcggcacaaagtgcactaggtgcacctagcaaattgattgatggccgaatggctgtctgc
aatttagcttgtgagggattaactggtgcaactaccacaccggatctaacccagaggaaa
ctctacattgggggtttgtcgccagagatctcaagtgagatgctgcttcatttttttgga
agatatggtgagattgaagaaggctcagttgcctataacaaagatactaatgaatcacgt
gggtttggttttgttacatacaagacagtggaggctgcaaagaaggccatagatgatcca
cacaagttgcttggggggagaactatcactgtgaagcttgctgatacccacaagggcaag
acggtacaaatgcagtcaccagcgcccatggttccagtacctgtaccaatagcagcagct
ggttatgcgcagccaggtaaagcaccagttggcagtggtactcctgttggttatccttat
catcaaactgtagcatcatatccagcttcttcctaccctaatcctccagttgcacctgct
ccatatccaacacaatctcaagtttcatatgcaccagtttctgcaaagaaagaactgtta
ggactttcatcaacaccacctgtcggaatgggtggatacccttattactaccctaaacag
taa

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