Populus trichocarpa (black cottonwood): 7455681
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Entry
7455681 CDS
T01077
Name
(RefSeq) protein-tyrosine-phosphatase IBR5 isoform X1
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
7455681
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7455681
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
7455681
3.1.3.48 protein-tyrosine-phosphatase
7455681
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
7455681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
Init_tRNA_PT
PTP-SAK
Tc-R-P
Y_phosphatase
YjeF_N
Y_phosphatase3
Glyco_hydro_92
PSY3
Motif
Other DBs
NCBI-GeneID:
7455681
NCBI-ProteinID:
XP_002321157
UniProt:
B9IAM0
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All DBs
Position
14:complement(11487434..11490506)
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AA seq
274 aa
AA seq
DB search
MMMMRKRERENPCGVCGHYHKYEEGEVCGICGHRMPESTADKSPSVHLSAFPSQILPDFL
FLGSYDNASRSELLKTQGITRVLNTVPACQNLYKNSFTYHCLQDDKILQFDDAIQFLEQC
ERDKARVLVHCMSGKNRSPAIVMAYLMKSRGWRLAQCYQWVKERRPSVDLTQAVHQQLHE
YEQKLFGSNDNSNPALPVFLPVGAPSFSFGFPKANDPVPVQAFIGVGAPSIFTRPLEVPP
QEFQFGAGHPQNISESSLGTNLPNPNGGDVSMDS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgaggaagagggagagagaaaacccgtgcggggtatgcggtcactaccac
aagtacgaagagggtgaggtttgcgggatttgcggccaccgtatgcctgaatccaccgcc
gataagtctccctctgttcacctcagcgcctttccttctcagatcctccccgacttcctt
ttcttaggcagctacgacaacgcctctcgatccgagctcctcaaaacccaaggaattact
cgtgtgctcaatacagttcctgcgtgtcaaaatctctacaagaattcattcacctatcac
tgcctccaagatgacaagatcttacaatttgacgatgccatacagtttttagagcaatgt
gagagggacaaggctcgcgttcttgtccattgcatgtcaggaaaaaataggtctccagct
attgtaatggcttacttgatgaagtccagaggatggagacttgctcaatgttaccagtgg
gtgaaagagcggagaccatccgttgatctaactcaagccgtgcaccagcagttgcatgag
tatgaacagaagcttttcgggtcaaatgataatagcaaccctgccctgccagtcttcctt
cctgtaggtgcgccatcttttagctttggcttcccaaaggctaatgatccagttcctgtc
caagcattcattggtgttggtgctccctctattttcacacgtcctctagaagttcctcca
caagagttccagtttggagctggtcatccccagaacatatcagaaagctcccttggcacc
aatttgccgaacccgaatggtggggatgtttcaatggattcatga
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