KEGG   Populus trichocarpa (black cottonwood): 7455791
Entry
7455791           CDS       T01077                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03250  Viral life cycle - HIV-1
pop03272  Virion - Hepatitis viruses
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    7455791
   03272 Virion - Hepatitis viruses
    7455791
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7455791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7455791
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7455791
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    7455791
Exosome [BR:pop04147]
 Exosomal proteins
  Proteins found in most exosomes
   7455791
SSDB
Motif
Pfam: UEV Vps23_core
Other DBs
NCBI-GeneID: 7455791
NCBI-ProteinID: XP_024447472
LinkDB
Position
1:2526399..2528030
AA seq 403 aa
MVPPPPNHQAIQQFLSSVLSQRGPSALPYTEDTKWLIRQHLVSLTSTFPSLEPKTATFTH
NDGRTVNLLQADGTVPMTFESVTYNIPVIIWLIESYPRHPPCVYVNPTRDMVIKRSHSFV
NPSGLVAVPYLQNWIYPSSNLVDLARELSMIFGRDPPLFSQRPRPSPNPSYHPNQSSLTN
SSTFGSVGSGYPRQMVRPPQYPPPSPPYGGGEGKAGTEDAAEVFKRNVINKLVENVHGDM
LLLRKTRESEMENLFSAQAVLRRREEEINKGLKEMRDEMEGLESQLQVVLMNTDVLEAWV
RQNEGKVKGGMEDIDVDKAFECVDVLSKQMLECTAADMAIEDVVYSLDKAVQEGAMPFVQ
YLRNVRLLSREQFFNRATAAKVRAAQMQAQVASMAARAPRYAS
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggttcctccaccaccaaaccaccaagcaatccaacaattcctctcctccgtcctctcc
caacgcggcccttccgccctcccttacacggaagacaccaaatggctcatccgtcaacac
ctcgtctccctgacctccactttcccttccctcgaacccaaaactgctaccttcactcac
aacgacggccgcaccgtcaatcttctccaagcagacggcaccgttcctatgactttcgaa
tctgtcacttataacatccctgttattatctggcttatcgaatcttaccctcgtcaccct
ccttgtgtttacgtcaatcccacgcgcgacatggtcatcaaaagatcccattcttttgtt
aatccatcgggcctcgttgcggtcccttatttgcagaattggatctaccccagttctaat
ttggttgatttggctcgcgaattgagcatgatttttgggagggatcctcctcttttttct
cagcgtcctcgccctagccccaatcccagttatcatccgaatcaatcgagtttgacgaac
tcgtcgacttttggatcagtgggaagtgggtatccgaggcagatggtcaggccaccacag
tatccaccaccgtcgcctccgtacggtggtggggaggggaaggcgggaacggaggacgcg
gcggaggtttttaaaaggaatgtgattaataagcttgtggagaatgttcatggggacatg
ttgctgctgaggaaaacgagggagtcggagatggaaaacttgttcagcgctcaagctgtg
ttgaggaggagagaggaggagattaataaagggttgaaagaaatgagagatgaaatggaa
gggttggagtcgcaattgcaagttgttttgatgaatacggatgttttggaggcgtgggtt
aggcaaaacgaggggaaggtgaaagggggtatggaggacattgatgtggataaggctttt
gagtgtgtggatgttttgtcgaagcagatgttggagtgtacggcagcggatatggcgatt
gaggatgtggtttattcgttagataaagcggtgcaagaaggggcaatgccgtttgttcaa
tatttgaggaacgtgaggttgctgtctagagagcagttttttaacagagctaccgcagcg
aaagttagggctgcacaaatgcaggctcaggttgctagtatggctgctagggcaccacgt
tatgctagctga

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