Populus trichocarpa (black cottonwood): 7455791
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Entry
7455791 CDS
T01077
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03250
Viral life cycle - HIV-1
pop03272
Virion - Hepatitis viruses
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
7455791
03272 Virion - Hepatitis viruses
7455791
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7455791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7455791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7455791
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
7455791
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
7455791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
Motif
Other DBs
NCBI-GeneID:
7455791
NCBI-ProteinID:
XP_024447472
LinkDB
All DBs
Position
1:2526399..2528030
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AA seq
403 aa
AA seq
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MVPPPPNHQAIQQFLSSVLSQRGPSALPYTEDTKWLIRQHLVSLTSTFPSLEPKTATFTH
NDGRTVNLLQADGTVPMTFESVTYNIPVIIWLIESYPRHPPCVYVNPTRDMVIKRSHSFV
NPSGLVAVPYLQNWIYPSSNLVDLARELSMIFGRDPPLFSQRPRPSPNPSYHPNQSSLTN
SSTFGSVGSGYPRQMVRPPQYPPPSPPYGGGEGKAGTEDAAEVFKRNVINKLVENVHGDM
LLLRKTRESEMENLFSAQAVLRRREEEINKGLKEMRDEMEGLESQLQVVLMNTDVLEAWV
RQNEGKVKGGMEDIDVDKAFECVDVLSKQMLECTAADMAIEDVVYSLDKAVQEGAMPFVQ
YLRNVRLLSREQFFNRATAAKVRAAQMQAQVASMAARAPRYAS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggttcctccaccaccaaaccaccaagcaatccaacaattcctctcctccgtcctctcc
caacgcggcccttccgccctcccttacacggaagacaccaaatggctcatccgtcaacac
ctcgtctccctgacctccactttcccttccctcgaacccaaaactgctaccttcactcac
aacgacggccgcaccgtcaatcttctccaagcagacggcaccgttcctatgactttcgaa
tctgtcacttataacatccctgttattatctggcttatcgaatcttaccctcgtcaccct
ccttgtgtttacgtcaatcccacgcgcgacatggtcatcaaaagatcccattcttttgtt
aatccatcgggcctcgttgcggtcccttatttgcagaattggatctaccccagttctaat
ttggttgatttggctcgcgaattgagcatgatttttgggagggatcctcctcttttttct
cagcgtcctcgccctagccccaatcccagttatcatccgaatcaatcgagtttgacgaac
tcgtcgacttttggatcagtgggaagtgggtatccgaggcagatggtcaggccaccacag
tatccaccaccgtcgcctccgtacggtggtggggaggggaaggcgggaacggaggacgcg
gcggaggtttttaaaaggaatgtgattaataagcttgtggagaatgttcatggggacatg
ttgctgctgaggaaaacgagggagtcggagatggaaaacttgttcagcgctcaagctgtg
ttgaggaggagagaggaggagattaataaagggttgaaagaaatgagagatgaaatggaa
gggttggagtcgcaattgcaagttgttttgatgaatacggatgttttggaggcgtgggtt
aggcaaaacgaggggaaggtgaaagggggtatggaggacattgatgtggataaggctttt
gagtgtgtggatgttttgtcgaagcagatgttggagtgtacggcagcggatatggcgatt
gaggatgtggtttattcgttagataaagcggtgcaagaaggggcaatgccgtttgttcaa
tatttgaggaacgtgaggttgctgtctagagagcagttttttaacagagctaccgcagcg
aaagttagggctgcacaaatgcaggctcaggttgctagtatggctgctagggcaccacgt
tatgctagctga
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