Populus trichocarpa (black cottonwood): 7455796
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Entry
7455796 CDS
T01077
Name
(RefSeq) ABC transporter B family member 2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7455796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7455796
04147 Exosome [BR:
pop04147
]
7455796
04090 CD molecules [BR:
pop04090
]
7455796
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
7455796
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
7455796
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7455796
CD molecules [BR:
pop04090
]
Proteins
7455796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
AAA_16
AAA_21
RsgA_GTPase
AAA_15
DUF87
nSTAND1
DUF815
APS_kinase
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
7455796
NCBI-ProteinID:
XP_024448230
LinkDB
All DBs
Position
1:11397102..11404913
Genome browser
AA seq
1253 aa
AA seq
DB search
MSSQSNIEEADDVETKRQEEKKKQQKVPFWKLFAFADFYDCLLMGLGSLGACVHGASVPV
FFIFFGKLINIIGMAYLFPKEASHKVAKYSLDFVYLSAVILFASWIEVACWMHTGERQAA
KMRMAYLKSMLSQDISLFDTEASTGEVIAAITSDIIVVQDAISEKVGNFMHYVSRFLGGF
IIGFVRIWQISLVTLSIVPLIALAGGIYAYITIGLIAKVRKSYVKAGQIAEEVIGNVRTV
QAFAGEEKAVRSYVDALRNTYQYGRKAGLAKGLGLGTLHCVLFLSWALLVWYTSIVVHKN
IANGADSFTTMLNVVISGLSLGMAAPDVSSFLRATTAAYPIFEMIERNTLSNTSKKSIKK
LEKVDGHIEFKDVCFGYPSRPDVTIFDKFCLDIPSGKIVALVGGSGSGKSTVISLIERFY
EPLFGQILLDGNDIRDLDLKWLRKQIGLVNQEPALFAATIRENILYGKDDATLEEITRAA
TLSEAMSFINNLPDRFETQVGERGIQLSGGQKQRIALSRAIVKNPCILLLDEATSALDAE
SEKSVQEALDRAMLGRTTVVVAHRLSTIRNADVIAVVQEGKIVEIGSHEELISNPQSTYA
SLVHLQEAASSGGHPSLGPTLGPPLSMKYSQDTRSSFGASFRSDKDSISRAGAGALEPMR
TKNVSLKRLYSMVGPDWIYGIVGTIGAFVAGSLMPLFALGVTQALVAFYMDWDTTRHEVK
KIAILFCCGAVISVIFYGIEHLSFGIMGERLTLRVREMMFSAILRNEIGWFDDFNNTSSM
LTSRLESDATLLRTIVVDRSTVLLHNVGLVVTSFVIAFILNWRITLVVIATYPLIISGHI
SEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEEKILDLYARELVEPSKNSFT
RGQIAGIFYGICQFFIFSSYGLALWYGSVLMEKELAGFKSIMKSFMVLIVTALAMGETLA
LAPDLLKGNQMAASVFEILDRKTQVMGDVGEELKNVKGTIELRGVQFSYPSRPDTLIFMD
FDLRVRSGKSMALVGQSGSGKSSVLSLILRFYDPTAGKVMIDGIDIRKLKVKSLRKHIGL
VQQEPALFATTIYENILYGKEGASETELIEAAKLANAHGFISSLPEGYSTKVGERGVQLS
GGQKQRVAIARAVLKNPEILLLDEATSALDVESERIVQQALDRLMRNRTTVMVAHRLSTI
KDADQISVIQGGKIIEQGTHSSLIENKDGSYFKLFRLQQQQGLEQNHDNNEHI
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacaaagcaatattgaagaggcagatgatgtggagacgaagaggcaggaagag
aaaaagaagcaacagaaagttccattctggaagctatttgcttttgctgatttttacgac
tgtctgttaatgggattgggatctcttggtgcttgtgttcatggagcttcagtccctgtc
ttcttcattttctttggaaagttgataaatatcattggaatggcttatctctttcccaaa
gaagcttcccacaaagtagccaagtactcattggattttgtatatctcagtgcggttata
ttattcgcatcgtggatagaggtggcatgttggatgcatactggagaaagacaggcagcg
aagatgagaatggcgtatctgaaatcaatgttaagtcaagatataagtctattcgatact
gaagcgtcaactggagaggtcatagctgctattacaagtgatattattgttgtgcaagat
gccatttctgagaaggttggaaacttcatgcactatgtaagccggtttcttggtggattt
attattgggttcgttaggatatggcaaatcagtctggtgacgctatctatagtcccttta
attgcacttgctggtggtatctatgcatatataacaatcggccttattgctaaagttcgt
aaatcttatgtcaaggccggccaaattgctgaggaggtgatcggaaatgttagaacagta
caagcatttgcaggagaagagaaggcagtgaggtcatatgtagacgctcttagaaatacg
taccagtatgggagaaaagcaggcctggccaagggtctcggattggggaccctgcactgt
gtccttttcctttcatgggcattgcttgtttggtacactagcatagttgtccacaagaat
atcgccaatggtgctgactctttcaccactatgctcaatgttgtcatttctggcctgtca
ctgggaatggctgcgccagatgtttcttcatttctccgagccacaacagcagcctaccct
atttttgagatgatagagaggaacacattgagtaataccagcaaaaaatctatcaagaaa
ctagagaaagtcgatggccacattgaattcaaagatgtatgttttgggtacccttctcgt
cctgatgtaacaatcttcgacaaattctgcttagatatcccttctgggaagattgtagct
cttgtaggaggaagtgggtctggaaagagcacggtaatatctttgatcgaacgattctat
gagcctttatttgggcagatactgttagatgggaatgatattcgggaccttgacctcaag
tggcttaggaagcaaatagggctagttaatcaggagcctgctctttttgcagcaactatt
agagagaacattctctatgggaaagatgatgctacacttgaggagattacacgtgctgct
acactttcagaagcaatgtcttttatcaacaacctcccagatagatttgaaacacaggtt
ggtgagagaggaatacagttatcaggtgggcaaaagcaaaggattgcattatcacgtgct
attgtgaaaaatccatgcattcttttgcttgatgaagctacaagtgcactggatgctgaa
tctgagaaaagtgtgcaagaggctcttgatcgtgcgatgctcggaagaactactgtagtt
gtggctcatcggctttctacaataaggaatgctgatgtcattgcggtagttcaggaaggg
aagatagtagaaatcgggagccacgaggagctcatttcaaaccctcaaagtacctacgct
tcactcgttcatctccaggaggcagcttcctcgggaggccatccctcactcggtcctacc
ttaggaccaccactcagcatgaagtattctcaagacacaagatcaagctttggagcaagt
tttcgttctgacaaggattcaattagccgggctggtgctggtgcattggagcccatgagg
acaaagaatgtttcattgaaaagattgtattcaatggttggccctgattggatttacggt
atagttggaaccattggtgcatttgttgctggatccctgatgccgcttttcgctcttgga
gtcactcaggctcttgtagccttttacatggactgggacacgactcgccatgaagtcaag
aagattgcgatcctgttttgttgtggtgcagtaattagtgttatattctatggcatcgaa
catctctcttttggaatcatgggagagcgactcactcttcgtgttagagaaatgatgttc
tccgccattttgaggaacgagattggttggtttgatgatttcaacaatacaagctctatg
ctcacatctcgtctagagagtgatgcaactttgttacgaactatagttgttgatcgctca
accgttctcttgcacaatgttggtttggttgtcacatcatttgtcatcgccttcatattg
aactggaggatcacacttgttgtcatagccacgtatccactgatcattagtggtcacata
agcgagaaactcttcatgaagggctatggtggcaacttgagcaaagcatatctaaaggct
aacatgctagctggtgaggctgtgagtaacattcgcactgttgctgcattttgtgctgaa
gaaaagatacttgacctttacgcccgtgagcttgtagaaccttccaagaactcattcacc
cgtggtcagattgctggcatattctatggcatatgccagttcttcattttctcatcttat
gggcttgctttatggtacggttctgttctgatggagaaggagctcgctggctttaaatct
ataatgaagtcatttatggttttgattgtaacagcattagccatgggtgaaactctagcg
ttggccccagatcttctgaaagggaaccaaatggcagcatctgtctttgagatactggat
cgcaagacacaggtgatgggggatgttggagaagagttgaaaaatgtgaagggtacaata
gagttgagaggtgtccaatttagctatccttcaagaccagatacattgattttcatggac
tttgatctaagagtgcgttcaggcaagagcatggctttggtgggacaaagtggttctggt
aaaagctctgtcctttctctgatacttcgattctacgatccaacagcaggaaaagtgatg
attgatggcatagatatcaggaaactcaaggtgaaatctcttcgaaagcacataggccta
gtccaacaagagccagctctctttgccacaacgatctatgaaaacatattgtatggaaaa
gaaggagcctctgaaacagaattaattgaagcggctaagcttgccaatgctcatggtttc
attagttctcttcctgagggttactcgaccaaagttggtgaacgaggggtgcaattatca
ggtggccaaaagcaaagggtggccattgcccgagccgtcctaaaaaatccagaaatattg
ctacttgatgaagccactagtgctctagatgtggagtctgagcgtattgtgcaacaagct
ctggacagattgatgaggaaccgaacaacagtcatggtggcacataggctatcgactata
aaggatgcagaccaaatatcagttatacaaggggggaaaataatagagcaagggactcat
tctagtcttatagaaaacaaagacgggtcatatttcaagttgtttcgtcttcagcaacaa
caaggacttgaacagaatcatgacaacaatgaacatatatag
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integrated database retrieval system
