Populus trichocarpa (black cottonwood): 7455854
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Entry
7455854 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7455854
KO
K20283
golgin subfamily A member 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7455854
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
7455854
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crescentin
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
7455854
NCBI-ProteinID:
XP_024442973
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All DBs
Position
16:996565..1004708
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AA seq
1323 aa
AA seq
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MEGETQVSSDVPVVKVDTDVADPIKVTNGDLPQVEKEGKKEEDETDGEFIKVEKESLDVK
DGSHTAEAQSVVEADKPSVVERSLSGSARELLEAQEKMKELEIELERVAAALKHSESENA
QMKDEVLLVNEKLDESGKKYEELEISHKKVKEQIIEAEEKYSAQLNSLQEALQAQETKHK
ELVEVKESFDGITLELENSRKKMKELEHELEVSSGETKKFEELHKESGSHAESETQRALE
FERLLEAAKQSAKEMEDQMASLQEEVKGLYEKVSENQKVEEALKSTTAELSAANEELAAS
KSQLLEIEQRLSSKEALIIEITQELDLKKASESQVKEDVSALENLLTATKEDLQAKVSEL
EGIKLKLQEEINKRESVEAGLKTHEAQVSTVQEELAKVIKEKEALEAAMADLTGNAAQMK
ELCSELEEKLKTSDDNFCKADSLLSQALSNIAELEQKLKSLEDLHNESGAAAATASQKNL
VLEDLIQASNEAAEEAKSQLRELEARFTASEQKNVELEQQLNLVELKSSDAEREVREFSE
KISELSTALKEVEEEKKQLSSQMEEYQEKISHLESSLNHSSSRNSELEEELRIAEEKCAE
HEDRANMHHQRSLELEDSFQTSHSKAEDAGKKANELELLLEAEKYRIKELEEQNSALEKK
CMDAEADSNKYSGRISELASEIEAYQAKSSSLEVALQIAGEKEKELTELLNLFTNEKKTL
EEASSSSNEKLTEAENLIGVLRNELVVMQERFESIENDLKAAGLKEGDIMVKLKSAEEQL
EQQEKLLEEATTRRSELESLHETLTRDSEIKLQEALANFTNRDSEAKSLFEKLNTLEDQV
KTYEELIAETTGRSALVKEELDLCVLKMATLETSNEELKSQIVEAETKVSNSFSENELLV
ETNNQLKSKIDELQDLLNSAISEKEATSQQLVSHVSTITEITDKHSRAIELHSATESRMV
QAEAQLQEAIQSLALRDTETKDLNEKLNALEGHIKLNEELAHQGAAISESRKVELEESLL
KIKHLETVVEELQTKAGHYEKESGGLAEANLKLTQELASYESKLGDLEAKLSAILSEKDE
TVEQLHISKKAVEDLRQQLSDERQKLQSQISSVMEENNLLNETYQNGKKELQSVIIQLEE
ELMGQKANEDALKSEIESLKAEVAEKLALQTSLEELKKQLAAAEAQLKEQKEADSHNQLE
KDEAQKKSLEAKNKEVSHLENQVKELEQKLQVAGAKLLEKGDGSSPAEHKDGLEIKSRDI
GAVISTPTKRKSKKKLEAASAQASSSSQTHTQTADVSPAMTFKIILGVALVSIIIGVYLG
KRY
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagactcaagtcagttcagatgttccagttgtgaaggttgacactgatgtt
gctgatcctattaaggtaacaaatggagacttgccgcaagtagagaaggaaggaaaaaaa
gaagaggatgaaactgatggagaattcatcaaagtcgagaaggaatcgctagatgtgaag
gatggctctcatacagctgaggcgcaatctgttgtggaggctgacaagccatctgttgtg
gaaagaagtttaagtggttcggccagagaattgctggaggcgcaagagaagatgaaggaa
cttgaaatcgaattggaaagagtagcggcagcattaaagcactctgaatctgagaatgca
cagatgaaggatgaggtcttgcttgtcaatgagaagttggatgaaagtggaaagaagtat
gaggagcttgaaatcagtcacaagaaagtgaaagagcagataattgaagctgaggagaaa
tacagtgcacagctcaactctttgcaagaagctctacaagcacaagaaaccaagcataag
gaattggttgaggtcaaggaatcatttgatggcatcacccttgagctcgagaattcgaga
aagaagatgaaagagttggaacatgagctggaagtatcttctggtgagactaagaagttt
gaggagctgcacaaagaaagtggttcacatgctgaatccgaaacgcagagggccttggaa
tttgaaaggctgcttgaggcggcaaaacagagtgcaaaagaaatggaagatcagatggct
tctcttcaggaggaggtcaagggcctgtacgagaaggtttcagagaatcagaaagttgaa
gaggcacttaagagcactacagcagaactttcagcagctaatgaagagttggctgcttca
aaatcacagctgctggaaatagagcaaagactttcttcaaaggaggctcttatcatcgaa
ataacccaggaattggacctcaagaaagcctctgaatctcaggtgaaggaagatgtttca
gctcttgagaatttgctcactgcaacaaaagaagatcttcaagcaaaggtttccgagttg
gaagggatcaagctgaagttacaggaggaaatcaacaaaagggaatcagttgaggctggg
ttaaaaacccatgaagcacaggtctcaactgtacaggaagaattggctaaagtaataaaa
gaaaaggaagctctagaagcagccatggcggatctcactggtaatgcagcacagatgaaa
gagttgtgcagtgaacttgaggaaaagttgaaaacttcagatgataatttctgcaaagca
gattctcttttgtcccaagctttgtcaaacattgccgagctagaacagaagctgaagtct
cttgaagatctccacaatgaatctggagctgctgcagcaactgcctctcaaaagaacctg
gtgctagaggatttaatccaagcgtcaaatgaagcagcagaagaggccaagtcacaactg
agagagctcgaggcacgttttactgcatcagagcagaagaatgtggagcttgagcaacag
ttgaatttggttgaactgaaaagcagtgatgctgagagagaggtgagggaattctcagag
aaaatatctgaactcagtactgcattgaaagaggtagaggaagaaaagaaacagttgagt
agccagatggaggaataccaagaaaagattagccaccttgaatcttccctgaatcattca
tcgtctcggaattcagagcttgaggaagagttgagaattgcagaagaaaaatgtgctgag
catgaggaccgagcaaatatgcaccaccagcgcagccttgaacttgaagattcattccag
acatctcattccaaagcagaggatgctgggaaaaaggcaaatgagttggagttgctgctt
gaagcagaaaaatacagaatcaaggagcttgaagagcagaacagtgcattagaaaagaaa
tgtatggatgcagaagcagattccaataaatactctggcaggatatctgaactagcatct
gaaattgaggcatatcaagccaagtcatcaagccttgaagttgctctgcagattgctggg
gagaaggagaaagagctaacagaattactgaatttgttcacaaatgaaaagaaaacgtta
gaagaggcatcaagcagttccaatgagaagctgactgaagctgagaatcttattggggtg
ttgcgtaatgaactagtcgtgatgcaagagaggttcgaaagcattgaaaacgatctaaag
gctgctggattgaaagaaggtgatataatggtgaagctcaaatctgcagaggagcaactt
gagcaacaagaaaaattattagaggaagccactacaagaaggtcagagctcgagtcatta
cacgaaaccctaacaagggactcagaaatcaaacttcaagaagcattagcaaacttcact
aacagggattctgaggcaaaatccttgtttgagaaactgaatacccttgaagaccaagta
aagacctatgaagagctgatagctgaaacaactggaaggtctgcacttgtgaaggaagaa
ttggacttgtgtgtgttaaaaatggcaactttggaaacctcaaatgaagaactcaaaagt
cagattgtggaagcagaaactaaggtttccaactccttctcagagaatgaactcttagtt
gagacaaacaatcagctgaaaagcaagatcgatgaacttcaggatttgctaaactctgcc
atttctgagaaggaagccacatctcaacaacttgtttcgcatgtgagcactatcacagaa
ataacagacaaacactcaagagccatagaacttcattctgcaactgagtcacgaatggtg
caagctgaagcgcaactacaagaggccattcagagcctcgcactgagggatacagaaaca
aaggatttgaatgagaagctaaatgcacttgaagggcatataaaattgaacgaagaactg
gctcatcaaggagctgcaatttctgaatctcgtaaagttgagctggaagagagtctcctc
aaaattaaacatctggaaaccgttgtagaggaactgcaaaccaaggcaggtcactatgaa
aaagagagtggagggctagctgaggcgaatttgaagctcactcaggagctggcctcatat
gagtccaaactcggtgatttggaggcaaaattatctgcaatcctttctgagaaggatgaa
acagttgagcagcttcacatttcaaagaaggccgttgaggatttgaggcagcagctctct
gatgaaaggcagaaactacagtctcagatatcttcagttatggaagagaacaacctcctc
aatgaaacatatcaaaatggaaagaaagaacttcaatcagtgatcatccagcttgaagaa
gaactgatgggacagaaggcgaatgaagatgccttgaaatctgagattgaaagtctcaag
gctgaggttgctgagaagttggcattgcaaacttctcttgaggaacttaagaaacaattg
gcggcagctgaagctcaactaaaagaacagaaagaagcagattctcacaatcagctggaa
aaagatgaagcacagaagaaatcccttgaagccaagaacaaagaagtgtcacatctagag
aaccaagtgaaggaacttgaacagaaactgcaagtggctggcgctaaattattagaaaag
ggtgatggaagcagtccggctgaacataaagatggattggagattaaatccagagacatt
ggtgcagtcatttccactcccacaaaaagaaagagcaagaaaaagttagaagctgcatct
gcacaagcctcatcctcttctcagactcatactcaaactgcagatgtttcgcctgccatg
acctttaaaatcatcttgggagtggccttggtatctatcatcattggcgtgtatcttgga
aagcgttattag
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