Populus trichocarpa (black cottonwood): 7455859
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Entry
7455859 CDS
T01077
Name
(RefSeq) probable UDP-arabinose 4-epimerase 2 isoform X1
KO
K12448
UDP-arabinose 4-epimerase [EC:
5.1.3.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
pop01250
Biosynthesis of nucleotide sugars
Module
pop_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
7455859
Enzymes [BR:
pop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.5 UDP-arabinose 4-epimerase
7455859
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
KR
NmrA
Motif
Other DBs
NCBI-GeneID:
7455859
NCBI-ProteinID:
XP_024442894
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Position
16:complement(1066495..1070183)
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AA seq
277 aa
AA seq
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MDYLDSRRKSRCAGKIIAAALCITVCIIILKQNQSPTYSSLSLFSQHELGVTHVLVTGGA
GYIGSHAALRLLKDSYRVTKVDNLSRGNLGAVKVLQDLFPEPGRLQFIYADLGDAKAVNK
IFAENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLVVLEAMAAHKVKTLIYSSTCAT
YGEPVKMPITEQTPQLPINPYGKAKKMAEDIIIDFSKTTDMAVMILRYFNVIGSDPEGRL
GEAPQPELREHGRISGACFDAARGIIPGLKQRITIQC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggattatctggattcaagacgaaagagcagatgtgctggaaaaattattgcagctgcg
ctctgcattacagtatgcattatcatcctcaagcagaaccagtcacctacttatagcagc
ctcagcttgttctcccagcatgagctcggcgtaacgcatgtcttagtgactggaggtgct
gggtatattggctctcatgctgcacttcgactcttgaaggattcataccgtgtaactaaa
gtggacaatctttctcgagggaatctgggtgctgttaaagttctccaagatctatttccg
gagcctgggcggttacagttcatatacgcagacttgggagatgcaaaagctgtaaacaaa
atctttgctgaaaatgcatttgatgctgtgatgcatttcgctgctgttgcatatgttggt
gaaagtacaatggaacctctcagatattatcacaacatcacatcaaataccttggtagtt
ttagaagcaatggcagcacataaggtgaagacattgatttattctagcacttgtgcaact
tacggcgagcctgttaagatgccgattacagaacaaactcctcagcttccaatcaacccc
tatggaaaagccaagaaaatggcagaagatatcataattgacttctcaaaaaccactgac
atggctgtcatgatcctaagatacttcaatgttattgggtctgatccagaaggaagatta
ggggaagctccgcaacctgaacttcgtgagcatggccgaatctctggcgcttgttttgat
gcagctcgaggaataataccaggactaaaacagagaatcacaattcagtgttaa
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