Populus trichocarpa (black cottonwood): 7455889
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Entry
7455889 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7455889
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7455889
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
7455889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
7455889
NCBI-ProteinID:
XP_002316808
LinkDB
All DBs
Position
11:complement(6434918..6439407)
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AA seq
515 aa
AA seq
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MVDNPANSGNTHNLDSRVSDFHRHTSSPPSGNGGLGSQTMIRPENCGTGLCGVSEDGNDE
KREGTKATHQKFRNYFYYDMPLYEETGAWIPVSVPPMIESDCEEWADRGFHFNGGYFPEG
DMGWSRYIGEDNELTMWDVIVEMVLAARGKVNAIASGDLQRCGISWLSSHLLEQAWQDMA
RTLNEANFGNVAEILEAEPPKWLPDSNASACMLCSVRFHPIMCSRHHCRFCGGIFCGDCS
KGRSLLPVRFHVTDPLRVCDVCCVRLESVQPYLMDQVSNAAQLPTHDLTDLSTLRSWVNF
PWGQTMGYEIYKAANTIQGYNKVGYLKPEKSIPDAILRQAKGLAIITVVKVGVMVTYNVG
TGLVIARREDGSWSPPSAISTLGVGWGAQAGGELTDFIIVLRTTEAVKTFCGYAHLSLGA
GVSAAVGITGRAFEADLRAGDGGYAACYTYSCSKGAFVGCSLEGSVVATRSKENSRFYGS
QSISASNILLGSLPRPPAAAILYRALVDLYQKLDR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaaccctgcaaattccggaaatacccacaatctggattctagggtttctgat
ttccatcgtcataccagctctcccccatcgggtaatgggggattagggagccaaacaatg
attagacctgaaaattgtggtactgggttatgtggagtctctgaggatgggaatgatgag
aagagagaaggaacaaaagctacccatcaaaagtttaggaattacttttattatgacatg
cccctttatgaagaaactggagcttggataccggtttctgtcccgcccatgatagaaagc
gattgtgaagagtgggcggatagaggttttcacttcaatggtggttattttcctgaaggt
gatatggggtggagtcggtatattggagaagacaatgagttgactatgtgggatgtgata
gtagaaatggtgcttgcagctcgtggaaaagtgaatgcaattgcttctggtgatttacag
aggtgtgggatttcgtggctatccagccatttacttgagcaagcttggcaagatatggct
cggacactcaatgaagctaattttggtaacgtggctgaaattcttgaagcggagcctcct
aaatggttacctgatagcaatgcttctgcttgtatgctttgtagtgtgcggtttcatccg
attatgtgctccaggcatcactgcaggttctgtggaggaatattttgtggtgattgctct
aaaggaaggagtttgttgccagtaaggtttcatgtcacagatcccctgcgagtctgtgat
gtatgctgtgtgcgacttgaatctgtccagccatatttgatggaccaagtaagcaatgct
gcccagctaccaacccatgacctgacagacctcagcactttgagatcgtgggttaacttt
ccatggggacagacgatgggatatgagatttataaagcagcaaacacaattcaaggttat
aataaggtaggttatttgaaacctgagaagtcaattccagatgccatcctacgacaagca
aaaggccttgcaataattacagttgtgaaagttggggtgatggtcacgtacaatgttgga
acaggacttgtaattgctcgcagagaagatggttcatggtctccaccttctgccatatct
acacttggtgtgggatggggagctcaggctggaggtgaattgactgatttcataattgtg
ttgagaactactgaagcagtcaagacattttgtggttatgcacatctgtcattaggtgct
ggtgtaagtgcagccgttggcatcactggacgtgcatttgaagctgatttacgggctggt
gatggcggttatgctgcttgttatacatacagctgcagtaaaggagcgtttgttggatgt
tcccttgaaggtagtgttgtcgctacccgctcaaaagagaattccagattctatgggagc
cagtctatatctgcatcgaatatacttcttggctcattgcccagaccacccgcagctgca
attctgtatcgtgcacttgtggacctatatcagaagctcgataggtga
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