KEGG   Populus trichocarpa (black cottonwood): 7455913
Entry
7455913           CDS       T01077                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7455913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7455913
   03041 Spliceosome [BR:pop03041]
    7455913
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     7455913
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     7455913
Spliceosome [BR:pop03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    7455913
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 7455913
NCBI-ProteinID: XP_002316830
UniProt: B9I1M7
LinkDB
Position
11:complement(5569258..5576278)
AA seq 368 aa
MDFIKKRKADENGNSIPTGTTPSSPITPLTPEEIRKIIEPFTKDQLLDILQSATLHHSDV
LNSVRSVADGDISLRKLFIRGLSSETTSETLRILFSSSGELEEAIVIHDKNTGKSKGFGF
ITFKHVDAAMLSIREPSKKIDGRITVTQLASNNSSTTDVSLRKVYVGNVPFEVSSERLLG
FFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKNEEGAKAAIADPMKNIDGHQVVCKFAADN
RKVNKNSQVGAITQTSQPLTYPPLTGNSQNYGPASTNSYQINTSMTGSGYNGSYRHPPYL
GAGLNDGGLNNAGALMYRMPQASGSGVYPDTGSYALPQHQQPSSMSMPMPPRLPHGAGGM
YQGMPPYY
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggacttcattaaaaaacgcaaagccgacgaaaacggcaattcaatccccaccggcacc
actccctcatccccaatcacgccactaacccccgaagaaatccgtaaaatcatcgaacca
tttaccaaagaccaactattagacatcctccaatccgccacgctccaccattctgacgtc
cttaactctgtccgttccgtagccgacggcgacatatccctccgaaagctctttattcgt
ggtctctcttccgagacaacctcagaaaccctccgaattctcttttcttcgtccggagaa
ctcgaagaagctattgttattcacgacaagaacacaggtaaatcgaaaggtttcgggttt
attacattcaaacatgtagacgctgctatgctttcgattagagaacccagtaaaaaaatt
gatggaaggattactgttacgcaattagcatcgaataattcgagtactactgatgtttcg
ttaaggaaagtatatgttgggaatgtgccttttgaggttagttctgagaggttgttgggt
tttttttcaatgtatggtgagattgaagaaggcccgcttgggtttgataaatcgactggg
aaatcaaagggtttcgcatttcttatatacaagaatgaggagggggcaaaggctgctatt
gctgatcctatgaaaaatattgatgggcatcaagttgtttgtaaatttgctgctgataat
aggaaggttaataagaatagtcaggttggtgcgattacacaaacatcacaaccattaacg
tatccaccgctaacaggaaattcacaaaattatgggcctgctagtactaatagctatcag
atcaatacttcaatgacgggttctggatataatggatcttataggcatccgccatattta
ggggcgggtttgaatgatggtggactgaataacgcaggggctttaatgtataggatgcca
caggcttcgggttctggggtatatccagataccgggtcttatgcattgcctcagcaccag
cagccatcgtcaatgtcaatgccaatgccgcctcgattgccacatggagctggagggatg
tatcagggtatgccaccatattactga

DBGET integrated database retrieval system