Populus trichocarpa (black cottonwood): 7455965
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Entry
7455965 CDS
T01077
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7455965
03036 Chromosome and associated proteins [BR:
pop03036
]
7455965
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
7455965
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
7455965
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
7455965
microRNA pathway
RISC loading complex
7455965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3910
Motif
Other DBs
NCBI-GeneID:
7455965
NCBI-ProteinID:
XP_002320489
LinkDB
All DBs
Position
14:11341891..11349764
Genome browser
AA seq
910 aa
AA seq
DB search
MEKISGGSPPPPPPPSVPANMNPELVEVPRHPERSAIPKYSMISRRGVGTSGRHISLLTN
HFKVSVNVPDAVFYQYNVSITSEDNRAVESKGIGRKLIDRLYQTYSSEFAGKRFAYDGEK
SLYTVGPLPQNKSEFTVVLEESFAKHESGSPGGGESPPAAVKRSKRSYRSKTFKVETSYA
AKIPLKSIALALKGIEIDNSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFNDVG
GGVTGVKGFHSSFRTTQGGLSLNMDVSTTMILTPGPVIDFLIVNQNVREPRYVDWVKARR
MLKNLRVKTKHNNMEFKIIGLSEKPCNQQYFPMKLKNRDGANVEAQIVEVTVYDYFTKHC
GIQLGYSAYLPCLDVGKPKRPNYLPLELCSLISLQRYKKALSSMQRASLVEKSRQKPQER
IKTVTEAMRSYCYDEDPVLSSCGISIEKQMTQVDGRILETPKLKVGNSEDCIPRNGRWNF
NNKTLLNPTSISKWAIVNFSARCDISHVSRELINCGRRKGINIERPHTLIEEDQQSRRGS
PLARVERMFELIREKLPGPPEFILCVLAERKNSDIYGPWKKTSLSDFGIVTQCISPTKIN
DQYLTNVLLKINSKLGGINSLLAIEHSSHIPLIMDTPTMILGMDVSHGSPGRSDMPSVAA
VVGSRCWPLISRYRASVRTQSPKVEMIDALYKPLANGNDDGIIRELLVDFFQTSKGHKPK
QIIVFRDGVSESQFNQVLNIELEQIIKAYQHLGEVDIPKFTVIVAQKNHHTKLFQAGGGT
ENVPPGTVVDTKIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDELLNLVHSLS
YVYQRSTTAVSIVAPICYAHLAAAQIGQFMKFEDFSETSSGQRSMTSVGSTPVPELPRLH
ENVEGSMFFC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatatcaggtggatctccacccccacctcctccaccgtcagtaccagcaaac
atgaacccagaattggttgaagttccccggcatccagaacgatcagccattcccaaatat
tctatgatcagtaggcgtggggttgggactagtgggcgtcacatatctttgctcaccaac
cactttaaagtttctgtcaatgttccagatgcagtattttaccagtataatgtttccatt
acctcagaagataatagagctgttgaaagcaagggaattgggaggaaactgatcgatagg
ctttaccaaacttattcctcagaatttgctggtaaaagatttgcttatgatggggagaaa
agtttgtacactgtgggccctcttccacagaacaagtcggagttcacagtggtgcttgag
gaatcttttgcaaaacatgaaagtgggagccctggtggtggtgagagccctcctgcagct
gttaagcgatcaaagcgctcttatcggtcaaagacttttaaggtagaaacaagctatgct
gctaaaatccccttgaagtcaatagcccttgccctcaaaggaattgagatagacaatagc
actcaggatgcactcagagtgctggatattatcttaaggcagcaagcagctaacaggggg
tgccttttggttaggcagtcgttctttcatgatgattcaaggaacttcaatgatgtggga
ggtggtgtaactggtgttaagggtttccattctagcttccgtaccactcagggtggcttg
tctcttaacatggatgtgtccactacaatgatcctaactcctgggccagtaattgatttt
ctgatagttaatcaaaatgtccgggaacctcgctatgttgattgggtgaaggccagaagg
atgttgaaaaatttgagggtgaagacgaagcataacaacatggagtttaaaataattggt
ctgagtgagaagccatgcaatcaacaatattttcctatgaaactgaaaaacagggacgga
gctaatgttgaagcacagattgttgaagttactgtatatgattatttcactaaacactgt
ggcatacaacttggttattctgcatacctaccctgccttgatgttggtaaaccaaaacgt
ccaaactacctgccactggagctttgttcacttatttcacttcaacggtataaaaaagct
ttatcttcaatgcaaagagcatctttggttgaaaaatcacgacaaaagcctcaggaaaga
ataaaaactgtgactgaagccatgagaagctactgttatgatgaggatcctgtgctttct
tcatgtggtatttctatagaaaaacaaatgacccaggttgatggccgcatccttgaaacc
ccaaagttgaaggttggtaatagtgaggattgtatcccacgaaatgggagatggaacttt
aacaataagacacttttaaaccccaccagcatcagtaagtgggccattgtcaacttttct
gctcgctgtgatattagtcacgtctcccgtgagcttatcaactgtggaaggagaaagggc
attaatattgaacgcccacatacattaattgaagaggaccaacaatctagaagaggcagc
cctcttgctagagttgaaaggatgtttgagctgatcagagagaagcttccagggcctcct
gaatttattctttgtgtattggcagagaggaaaaactcagatatttatggaccgtggaag
aagacaagtctcagtgattttggcattgttacacagtgcatatccccgacgaagattaat
gaccagtatcttacaaatgtgcttcttaagatcaattctaagctaggaggaataaattct
ctgttggcaattgagcactcctcacatattccattgataatggatactcctacaatgatt
ctgggcatggatgtctctcatggctctccaggtcgatcagacatgccatcagtggctgcg
gttgttggatctcgatgttggccactgatttctaggtacagagcatctgtaagaacgcaa
tctcctaaggtggagatgattgatgctttgtacaagcctttagcaaatgggaatgatgat
ggtataataagggaactgctcgtggatttctttcaaacaagcaaggggcacaaaccaaaa
caaattattgtgttcagggacggtgtcagcgagtcacaattcaatcaggtgctgaacatt
gagctggagcaaattatcaaggcctatcaacatcttggtgaggttgacataccgaagttc
acagtaattgtggctcagaagaatcaccacacaaagctttttcaagctggtggtggcact
gaaaatgttcctcctgggacagttgttgacacaaagattgttcatcctagaaactatgat
ttctacatgtgtgctcatgcaggcatgattggaacttcaaggccagcacactatcatgtc
ttgctcgatgagattggtttctctccagatgaattgctaaatcttgtccactctctttca
tatgtgtatcaaaggagtaccactgctgtttcgattgtggctcccatatgttatgctcac
ctggctgcagcacagatagggcagtttatgaagtttgaggatttttctgaaacctcttcc
ggacagagaagcatgacatcagttggaagcacccctgttccagagctccccaggttacac
gaaaatgtcgagggttcaatgttcttctgctga
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