Populus trichocarpa (black cottonwood): 7455968
Help
Entry
7455968 CDS
T01077
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7455968
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
7455968
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
7455968
Prokaryotic type
7455968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
7455968
NCBI-ProteinID:
XP_002321158
UniProt:
B9IAM1
LinkDB
All DBs
Position
14:complement(11494695..11498073)
Genome browser
AA seq
366 aa
AA seq
DB search
MQISIPLFSSPPNPKIPSLFPFQHLPSIFHGKGKPTTLTTRNFHFLPLKIKNKPFIVKAS
SFLSEIGRAIEEEEDYRKARAAVIRKGIDLGGYAIEGLSIGGQETCIIIPEFKCAFDIGR
CPTRAIHQNFVFITHAHLDHIGGLPMYVASRGLYSLKPPTIFVPPCIKDDVEKLFDIHRA
MGQVELNFDLVALDVGETYELRNDVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYIHLKGK
QIEKLKKSGVEITDIILSPEVAFTGDTTAEYMLDPRNADALRAKVLITEATFLDEDFTTE
HARQRGHTHLFEIIENAKWIRSKAILLTHFSSRYSIEDIREAVSKLQSRVSAKVVPLTEG
FKSMYS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctctatccctttattctcttcacctcccaatcctaaaatcccatcacttttc
ccttttcagcacctccccagtattttccatggaaaaggaaaacctacaacattaacaacc
cgtaattttcatttcctccctctcaaaattaaaaacaagcccttcatcgtcaaagcctcc
agctttttatcagaaatcgggcgtgctattgaggaagaagaagactacagaaaggcccgt
gctgctgttatccgtaaaggaattgacttgggagggtatgcaattgagggtctgtccatt
ggaggccaagagacttgtataattataccagagtttaagtgtgcttttgatattgggagg
tgccccaccagagctattcaccagaattttgtcttcatcactcatgcccatcttgatcac
attggtgggctgccaatgtatgtggctagtcgtggtttgtacagcttaaagcctccaaca
atatttgttcctccgtgtatcaaagacgatgttgagaaactatttgacattcacagggca
atggggcaagtagagcttaattttgatttggttgcattggatgtgggtgaaacatatgaa
ttgcggaatgatgttgtggtccgaccattcagaactcaacatgttatacccagtcagggt
tatgtcatctattcggtgaggaaaaaattgaagaaacaatacattcatctcaaaggaaaa
caaatagagaaattgaagaagtctggtgttgagattacagacataatattgtcccctgag
gtggcctttactggagataccacagcagagtacatgcttgatccgcgtaatgcagatgcg
ttgagggcaaaagttctaataactgaggcaactttcctggatgaagattttaccactgag
catgcacgacagcgtggtcatacccatttgtttgagattattgaaaatgccaaatggatc
cggagtaaagcaatcttgttgactcatttctcctcccgctacagtatagaggacatacgt
gaagctgtgtcgaagttgcaatccagggtgtcagcaaaagtagttcctctgacagaaggt
ttcaaatcaatgtactcatag
DBGET
integrated database retrieval system
