Populus trichocarpa (black cottonwood): 7456105
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Entry
7456105 CDS
T01077
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 13 homolog A
KO
K03039
26S proteasome regulatory subunit N9
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7456105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7456105
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
7456105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSD13_N
PCI
Rpn9_C
Motif
Other DBs
NCBI-GeneID:
7456105
NCBI-ProteinID:
XP_002304360
UniProt:
B9GZK9
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Position
3:complement(12402927..12407998)
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AA seq
386 aa
AA seq
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MAALQYLETQRNAHPELDEWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQFYH
NFITDFETKINLLKLAHFAVIVSRRYAEKEAAISYLEGVIEKLRATREQRIEEPVLYIKM
QIAIFKLEQGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQNYKHRQEFADFYKS
ALLYLAYTAVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTQVEWLYY
ILQAFNSGDLVRYQELCRVHNTALRAQPALVQNEQKLLEKINILCLMEIIFSRPSENRTI
PLNVIAERTKLSIEDVEHLLIKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD
RLDNWLDKVHTALLSVEAETPDLVAS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctacagtacttggagacacagcgcaacgcgcatccggaactggacgagtgg
tacaactcacttgcagatctgtaccagaagaagctttggcaccaactcactctcaaactt
gaacagtttgtcgctctcgccgtctttcaggctggtgatgctctaatacagttttatcat
aattttatcaccgactttgagacaaagatcaaccttctcaagcttgcacactttgccgtt
atagtttctcggcgttatgcagagaaagaagctgccattagctatcttgagggggtgatt
gaaaagcttcgagcaactagagaacagcgtatagaagaaccagtcctttacattaagatg
caaatagccatattcaagcttgagcagggggatcagaaagagtgcaagaagcttttagaa
gatggaaagagtacccttgacagtatgactgatatagatccatccgtgtatgccagttat
tattgggtttcgtctcagaactataaacatcgtcaggaatttgctgatttctataaaagc
gctcttctttatctggcatatacagcagtggagtccctctcagactcatttaagctggat
ttggcatttgatctttctctttctgcgcttttgggggataacatctacaactttggagag
ttgctggctcatcctataataaagagcctactgggcactcaggttgagtggctctactac
attctccaggcatttaactctggtgacttagttcgctatcaagaattgtgccgtgtgcac
aacactgccctgagggcccagccagcattagttcagaatgagcagaagctattagaaaag
attaacattctctgcctaatggaaattatctttagccgtccttctgaaaatagaactatt
ccattaaatgttattgctgagcgcacaaagctttccattgaggatgtggagcatcttctc
ataaagagtctctctgtccaccttattgagggtataattgatcaagtcgaaggaacagtg
cacgtttcctgggtacagccaagagttctggggattccacagatcaaatccttgcgagat
cgactggacaattggttggataaagtacacactgctttgttatcagtggaggcagaaaca
cctgatctagttgcatcataa
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