Populus trichocarpa (black cottonwood): 7456185
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Entry
7456185 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7456185
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7456185
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7456185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
7456185
NCBI-ProteinID:
XP_024449113
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All DBs
Position
1:complement(35289234..35293463)
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AA seq
445 aa
AA seq
DB search
MGGKSSRQANWSSNPSSWDAYQQPSYSQESFNHSPPPPPPPQQPYASQQSFGSQQHYSSS
QDYGGGGDRRRLDRKYSRIADDYKSLHQVTEALARAGLESSNLIVGIDFTKSNEWTGARS
YNRRCLHHIGDGFNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQDVFSFYPDERF
CNGFEEVLSRYREIVPNLRLAGPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQVTRSVD
TEHGQLSPQEQKTVEAIVQASKLPLSIILVGVGDGPWDMMREFDDNIPARDFDNFQFVNF
TEIMSKNVDTSRKETEFALSALMEIPSQYKATIELSILGQSKGIVSERVALPPPLYGAAS
FSSSKPSRPASFKPSVPSYQRDSQPFSSAPPATCSTYDNQLCPICLSNSKDMAFGCGHQT
CCECGETLQLCPICRSTIETRIKLF
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggggggcaaaagttcaaggcaagccaattggagttcgaatccatcttcatgggatgcc
tatcaacaaccatcatatagtcaagaaagttttaatcattcaccaccaccaccaccacca
ccacagcaaccttatgcatcacaacaatcatttgggtcgcagcagcattattcttcctct
caagactacgggggtggcggcgacagaagaaggctcgacaggaagtattcaaggattgca
gatgattacaaatcattacatcaggtgaccgaggctcttgcacgtgctggtcttgaatct
tccaatctcattgttggtattgatttcacaaagagcaatgagtggacaggtgccaggtca
tataacagacgatgcttgcatcatatcggcgatggttttaatccatatgaacaagcaata
tccattattgggaaaacgctggctgcctttgatgaggataacttgattccctgttttgga
tttggggatgcatcaacacatgatcaggacgtcttcagtttctatccagatgagaggttt
tgcaatggatttgaggaagttttgagtcggtatagggaaatcgtgcccaatctacgactt
gcaggacctacatcatttgcaccaatcattgaaatggcaatgaccattgttgagcagagc
gctggccagtaccatgtactattgataattgcagatggacaggttactagaagtgttgat
accgagcatggccagctaagtccacaggaacagaagaccgtcgaagccattgtacaagca
agcaagcttcccttatctattatattagttggggtgggagatgggccctgggatatgatg
agggagtttgatgataacattcctgctcgagattttgataatttccagtttgtgaatttc
acagaaataatgtcaaagaatgtggacacatcaagaaaggagacagaatttgcgctttct
gctctgatggaaattccttctcagtacaaggcaactatagagcttagtatattgggtcag
agcaagggaattgtttctgagagagttgccctgcctccacctttgtatggtgcagcatct
ttcagcagctctaagccttctcgtcctgccagttttaagccaagtgttccttcttatcaa
agagacagccaacctttcagctcagctccacctgctacgtgttcaacttatgataatcag
ctttgccctatttgcctcagtaattcgaaggacatggcctttggttgtgggcatcagaca
tgttgcgaatgtggagaaacccttcagttatgtccaatctgtcgaagtacgatcgaaaca
agaataaagctcttttaa
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